Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01689 ATGGCCACGTATTATGGTGCCTTGAAGGTTTTGGCTTCTTGGACATCCTCAGCTTCATTTGTTTTAAGCTACAAGGTGGTAATGAAGGCTCCTCCCAGTGGTTACTTGCCTAATTCTGGCGAAGGGGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCACTGGTTTCTTTACCTCCTGTTGGAAGTCTTGTGGTTTACTTCCCTCAAGGACACAGTGAGCAAGTTGCAGCATCCATGCAAAAGGAGGCTGACTTCATACCCAGTTATCCTAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGCCCTGCACGCTGATCCTGAAACTGATGAAGTCTATGCACAGATGACCCTTCAACCTGTAAATAAATATGACAAGGAAGCAATATTGGCATCAGACATGGGTCTCAAACAAAACCAACAACCTACTGAGTTCTTTTGCAAAACTCTTACAGCTAGTGACACAAGCACCCATGGTGGATTTTCTGTGCCTCGTAGAGCAGCTGAGAAAATATTCCCTCCTCTGGATTTTTCTATGCAACCTCCAGCTCAGGAGATTGTAGCCAAAGATTTGCATGACAATACATGGACATTTAGACATATTTATCGCGGACAACCAAAGAGGCATCTACTGACGACTGGTTGGAGTGTCTTTGTTAGCACTAAAAGGCTGTTTGCTGGAGATTCAGTTCTTTTTATTAGAGATGAAAAACAACAACTTCTTTTAGGTATAAAGAGGGCTAATAGACAGCAGCCAGCACTATCTTCATCAGTAATATCCAGTGACAGTATGCATATTGGCATTCTTGCTGCTGCAGCTCATGCAGCTTCAAATAACAGCCCATTTACTATATTTTATAATCCAAGGGCCAGCCCTTCTGAATTTGTAATCCCATCGGCCAAGTATAATAAGGCCTTGTACAATCACGCTTCCCTTGGAATGAGATTCAGAATGATGTTTGAGACTGAGGAGTCAGGGGTACGCAGATATATGGGTACAATCACTGGTATCACTGATGTGGATCCTGTCCGATGGAAGAATTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCGACAGCTGGTGAGCGCCCGAGCAGGGTTTCAATTTGGGATATTGAACCAGTGGTGACTCCTTTCTATATTTGTCCTCCTCCATTTTTCAGGCCCAAGTTCCCCAAGGAGCCAGGAATGCCAGATGATGAGTCTGATATAGAAAATGCTTTCAAGAGAGCAATGCCTTGGCTTGGAGATGACCTTGGCATGAAGGATGCCTCTAGTTCAGTCTTCCCTGGTTTTAGTTTGATGCAATGGATGAGCATGCAGCAGAATAATCAGTTCTCTGCTGCCCAATCTGGATTTATACCCCCATCCATGCTTTCATCCAATGCACTGCATGGTAACCTTACCACTGATGATCCATCCAAATTATTGAGCTTTCAAGCTCCTGTCCTCTCTTCACCAAATCTTCAATTTAACAAACCTAATTTAGCAAACCAAGTCAACCAATTGCAACAATCCCCAACGTCATGGCCTCCgcagcagcagcagcaacagcagaagctgcagtcaatgttgcaaacacccttaaacccactccagcagcagcagcaacagaggcaacagcagctgcctgtaccacaaaacctgtcacaaccacagcagcaacagccccaaatgcctcaacagagagcacaacagccacaacaacagcaacagcagtcgtgtcaacagaccatcatgagtaacgggacagttgcTTCTAACCAGATTCCAAATCAGTGTGTACAACAACCAGTAACATACTCACAACTTCAGCAACAACAATTACTCTCAGGAAGTATCCCACCCCAACAAAGTTTTCAATCACCCAATAAGAATGCATTGTTGATGACATCCTTACCacaagactcacagtttcagcaacaaatagaccagcaagctagtctcttacagaggcagcagcagcagcagacacagttgcaatcatctccgttgcagttattgcaacaaagcttgtcacagagggcatcacagcaaccacaaatgactcaaatgtgtcagcaaaacagctcagagcaacaaccacagttgcagttgctacaaaaattgcagcaacagcagcagcagcagcaacaacaacaacagcaacaactcctttccacttctagcccacttttgcagtctcagcttctacatcaacaaaatactcatcaacaaaaccagcaattgccgcagctgcctctatcacagggtcatcagcctcaacagctTGGAAACAATGCTTTCTCAATGGAGAAGCTTCTCAATGGAAACAACTACTCTACTTCATCTCTGATGCAAACACAGCAGCTTTCTGTGAACCAACCCCATAATACACAGAAATCACTGACTAATACTAGAGCTCCCTCTACTCTTACAGATGGAGATGCCCCATCATGCTCAACTTCACCATCTACTAATAATTGCCAGATATCTCCAAATCTGATGAAAAGAAATCAACATGTACCGGCAACATTAGGAGGACCTTCAGTACTTGAACCCACCAATCATCTGATGCAGGGACTTCATAGCAAGTCTGAGATGCAGATCAAACATGAATTACCTAGTGTAAGAGGAACTGATCAGCTGAAGTTCAAAGGGACAGTTGCTGATCAGATGGAAGCTTCTTCTGGAACATCTTACTGTATTGATCCTAATAATATCCACCAGAACTTCCCACTTCCCAACTTCTGCATGGATGGGGATGTCCAATCAAACCCAAGAAACAATCTTCCATTTGCCTCTAATCTTGATGGATTAACACCTGATACTTTTCTCTCAAGAGGGTATGATTCTCAAAAGGATCTTCAAAACTTGCTGTCTAATTATGGTGGTGCTCCAAGAGACATTGAAACTGAGCTGTCCACTGCTGCTCTTAGTCCACAGCCGTTTGGGGTGCCAGGCATTCCTTTTAAGCCTGGATGCTCAAGTGATATTGCCATCAATGATCCTGGGGTTTTGAATAATGGCTTGTGGGCTAATCAGACTCAACGAATGCGAACATATACTAAGGTTCAAAAATGTGGCTCTGTTGGAAGATGTATTGATGTCACCCGTTACAAGGGGTATGATGAACTCCGGCATGATTTGGCTCGGATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACTGAGTGGAAACTAGTATATGTCGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAGGTACAGAAAATGAGCTTGGATGGGGATTTAGGTCATGTTCCAGTCCCCAATCAAGCTTGTAGTGGAACAGATAACGGCAATGCATGGAGGGGACAGTATGAGGATAACTCGGCAGCCTCATTTAATCGATAA 3450 0.3583 MATYYGALKVLASWTSSASFVLSYKVVMKAPPSGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALYNHASLGMRFRMMFETEESGVRRYMGTITGITDVDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKEPGMPDDESDIENAFKRAMPWLGDDLGMKDASSSVFPGFSLMQWMSMQQNNQFSAAQSGFIPPSMLSSNALHGNLTTDDPSKLLSFQAPVLSSPNLQFNKPNLANQVNQLQQSPTSWPPQQQQQQQKLQSMLQTPLNPLQQQQQQRQQQLPVPQNLSQPQQQQPQMPQQRAQQPQQQQQQSCQQTIMSNGTVASNQIPNQCVQQPVTYSQLQQQQLLSGSIPPQQSFQSPNKNALLMTSLPQDSQFQQQIDQQASLLQRQQQQQTQLQSSPLQLLQQSLSQRASQQPQMTQMCQQNSSEQQPQLQLLQKLQQQQQQQQQQQQQQLLSTSSPLLQSQLLHQQNTHQQNQQLPQLPLSQGHQPQQLGNNAFSMEKLLNGNNYSTSSLMQTQQLSVNQPHNTQKSLTNTRAPSTLTDGDAPSCSTSPSTNNCQISPNLMKRNQHVPATLGGPSVLEPTNHLMQGLHSKSEMQIKHELPSVRGTDQLKFKGTVADQMEASSGTSYCIDPNNIHQNFPLPNFCMDGDVQSNPRNNLPFASNLDGLTPDTFLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAALSPQPFGVPGIPFKPGCSSDIAINDPGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQKMSLDGDLGHVPVPNQACSGTDNGNAWRGQYEDNSAASFNR 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01689 1149 Pfam AUX/IAA family 1019 1108 IPR033389 -
Gma15g01689 1149 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Gma15g01689 1149 SUPERFAMILY CAD & PB1 domains 1036 1100 - -
Gma15g01689 1149 Gene3D - 1017 1111 - -
Gma15g01689 1149 Gene3D - 150 254 IPR015300 -
Gma15g01689 1149 Coils Coil 705 726 - -
Gma15g01689 1149 MobiDBLite consensus disorder prediction 1127 1149 - -
Gma15g01689 1149 SUPERFAMILY DNA-binding pseudobarrel domain 143 282 IPR015300 -
Gma15g01689 1149 MobiDBLite consensus disorder prediction 511 585 - -
Gma15g01689 1149 CDD B3_DNA 152 244 IPR003340 GO:0003677
Gma15g01689 1149 SMART B3_2 153 255 IPR003340 GO:0003677
Gma15g01689 1149 Pfam B3 DNA binding domain 153 254 IPR003340 GO:0003677
Gma15g01689 1149 PANTHER AUXIN RESPONSE FACTOR 19 28 1137 - -
Gma15g01689 1149 Pfam Auxin response factor 279 361 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma15g01689 1149 MobiDBLite consensus disorder prediction 794 835 - -
Gma15g01689 1149 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 28 1137 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma15g01689 1149 Gene3D - 316 387 - -
Gma15g01689 1149 ProSiteProfiles PB1 domain profile. 1022 1115 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01689 Gma-Chr15 17748841 17757950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01689 28 515 B3 DNA Binding Superfamily AT1G19220 81.967 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma15g01689 AUX_IAA 2.9e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01689 K14486 - gmx:100815277 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01689 15 17748841 17757950 Gma15g01689 15 17748841 17757950 ECH
Gma15g01689 15 17748841 17757950 Gma09g00660 09 7621370 7629225 GST
Gma17g00443 17 3623651 3629621 Gma15g01689 15 17748841 17757950 PCT
Gma13g00926 13 23397235 23403638 Gma15g01689 15 17748841 17757950 PCT
Gma15g01689 15 17748841 17757950 Gma17g00443 17 3623651 3629621 PCT
Gma15g01689 15 17748841 17757950 Gma13g00926 13 23397235 23403638 PCT