Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01679 ATGTCGAGCTCATCGGAGTACTCTGAATTTTCCGGCCAGAAACCGGCGAGGTCGCCGGAGAAATCGAGCTTCTCTCAGACTTGCAGTCTGTTGAGTCAATACATCAAGGAGAAGGGTAGCTTCGGAGATCTTACCCTCGGAATGACATCATGTGGGTCACCTGAGACATCTTGTCAATCTGCTACAACCATGAACTTGTTTCCTCCCAAGGAAAACAACGTGGCACCAAAGAACCTGACAGCTATGGATTTGCTCTCTCCACAAGCTTCCTCCTATGGACCTTCAGAGGAGATTCCAACCTTGGTTAATTCCAGCGCAATTAAGTCTGTGAGCAAGGGTGCTAAAACTGCACAGATGACAATCTTTTATGGTGGGCAAGTTGTTGTGTTTGATGATTTTCCTGCTGACAAAGCAAGTGAGATCATGTCCTATGCCACCAAAGGGGGGATCCCCCAAAGCCAGAACAATTCTGTCTACACCTACACACAGAGCCAGCCTTCATTTCCTCCTACTTTGATCAGAACTTCTGCTGATTCAAGTGCTCCAATTATTCCCAGTGTGAACATTACAAACTCCATTCGTGAGCACCCTCAAGCATCATCCAGACCTGTTGTTTATCTGCCAATTGCTAGAAAAGCTTCACTCCACCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTTCGAAAGCACCATATCAAGTAGCAAATGGGCCTTCTAACAAGGCAGCTGAGTCCATGCCATGGCTTGGGCTGAGTGCTTCTTCACCTCAAATCTGA 777 0.4685 MSSSSEYSEFSGQKPARSPEKSSFSQTCSLLSQYIKEKGSFGDLTLGMTSCGSPETSCQSATTMNLFPPKENNVAPKNLTAMDLLSPQASSYGPSEEIPTLVNSSAIKSVSKGAKTAQMTIFYGGQVVVFDDFPADKASEIMSYATKGGIPQSQNNSVYTYTQSQPSFPPTLIRTSADSSAPIIPSVNITNSIREHPQASSRPVVYLPIARKASLHRFLEKRKDRIASKAPYQVANGPSNKAAESMPWLGLSASSPQI 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01679 258 ProSiteProfiles Tify domain profile. 112 147 IPR010399 -
Gma15g01679 258 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 252 IPR040390 -
Gma15g01679 258 Pfam tify domain 115 145 IPR010399 -
Gma15g01679 258 MobiDBLite consensus disorder prediction 229 258 - -
Gma15g01679 258 Pfam Jas motif 208 233 IPR018467 -
Gma15g01679 258 PANTHER PROTEIN TIFY 10A 17 252 - -
Gma15g01679 258 MobiDBLite consensus disorder prediction 1 23 - -
Gma15g01679 258 SMART tify_2 112 147 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01679 Gma-Chr15 17561429 17564101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01679 1 253 Tify Gene Family AT1G19180 43.866 1.39e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma15g01679 tify 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01679 K13464 - gmx:100812618 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01679 15 17561429 17564101 Gma15g01679 15 17561429 17564101 ECH
Gma15g01679 15 17561429 17564101 Gma09g00654 09 7507755 7510317 GST
Gma17g00449 17 3686977 3689307 Gma15g01679 15 17561429 17564101 PCT
Gma13g00920 13 23351542 23354904 Gma15g01679 15 17561429 17564101 PCT
Gma15g01679 15 17561429 17564101 Gma17g00449 17 3686977 3689307 PCT
Gma15g01679 15 17561429 17564101 Gma13g00920 13 23351542 23354904 PCT