Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01677 ATGAGAAACCAACCTTGTATGAAGAGAGTGTGCGATTTGAATCAAGAGAGAACGGAGGTCGTAGCCACCGTGAGAGTGTGCGATCTGAACGAAGGTTATCGTGACTCTCCCATATCCAGGCCACGTGTGGATTTGATATTCCATTGGCTCTCATTTCATATTTTCGTTCCAAGCAGAACATCACACCTTATCCATCATCTGGATATAGCAGCAGATAAAGCGTCAGAATTAAAACACAAACGAGCACTTTCCTCCACTGCATTGTCAAGCCTTCCAAACAGAGAAATTCGTCAAAAGGGTTTCCCAGACAGAACACCCACATGCTTGAGTTTGACCAGAAGAACAGTTGCATATGCTACAAAAGGGGTCTCAGCTGTCTGTGAGCCACTTCCTCCAGATAGGCCATTGTGGTTCCCTGGTAGCTCACCTCCTGAGTGGCTTGATGGAAGTCTTCCTGGTGATTTCGGTTTTGACCCTCTTGGATTAGGGTCTGATCCAGAGTTGCTAAAGTGGTTTGCTCAAGCAGAACTAATGCATGCAAGATGGGCAATGCTCGCGGTGTTCGGAATTCTCGTACCCGAATTGCTCGAAAAAATCGGTTACATCGAAAACTTCTCTTGGTACGATGCTGGTGCGCGAGAGTATTTCGTGGACCCAACAACATTGTTCGTTGTGCAAATGGGCCTGATGGGCTGGGTGGAAGGCCGAAGATGGGCCGACATGGTCAATCCGGGGAGCGTTGACATTGAGCCCAAAGTGCCACACATTACGAACCCGAAGCCCGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCAATGATGTGGGGGAGAGGGTCACCGGAGCCAGTGATGGTTTTGAGGACCAAGGAGATCAAGAATGGAAGACTTGCAATGTTGGCCTTTGTTGGGTTCTGGTTCCAAGCTATTTACACTGGGGAAGGACCCATTGAAAATTTGATGGCACACCTTGCTGATCCTGGTCACTGCAACATTTTCTCGGCTTTCACGCGTTAG 1017 0.4867 MRNQPCMKRVCDLNQERTEVVATVRVCDLNEGYRDSPISRPRVDLIFHWLSFHIFVPSRTSHLIHHLDIAADKASELKHKRALSSTALSSLPNREIRQKGFPDRTPTCLSLTRRTVAYATKGVSAVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVFGILVPELLEKIGYIENFSWYDAGAREYFVDPTTLFVVQMGLMGWVEGRRWADMVNPGSVDIEPKVPHITNPKPDVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHLADPGHCNIFSAFTR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01677 338 Gene3D Chlorophyll a/b binding protein domain 144 329 - -
Gma15g01677 338 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 82 336 IPR001344 GO:0009765|GO:0016020
Gma15g01677 338 SUPERFAMILY Chlorophyll a-b binding protein 133 336 - -
Gma15g01677 338 Pfam Chlorophyll A-B binding protein 143 309 IPR022796 -
Gma15g01677 338 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 82 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01677 Gma-Chr15 17476194 17480034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01677 132 337 Chloroplast and Mitochondria Gene Families AT3G61470 68.447 4.97e-103 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01677 K08908 - gmx:100812066 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01677 15 17476194 17480034 Gma15g01677 15 17476194 17480034 ECH
Gma15g01677 15 17476194 17480034 Gma09g00652 09 7441234 7443995 GST