Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01676 ATGGCCGCCGCTGTTCGAATCCACCACCACCTCTCATTCCTTTTCTTGTTCTTATTCTTCATCTCTTTCTCATGCGGGACTGAAACTGATTCCCTCCTCCACCTCAAGAAATCCCTCACTAACTCTGACCGCTCCCTCTCCTCGTGGATCCCAAACATCTCCCCATGCTCCGGCACGTGGCTCGGCGTGGTCTGCTTTGACAACACCATCACGGGCTTGCACCTCTCTGACCTTGGCCTCTCCGGCTCGATCGACGTCGATGCCCTCGTCGAGATCCGTAGCCTCCGCACCCTTAGCTTCATCAACAACTCCTTCTCAGGCCCCATTCCAAACTTCAACAAACTTGGCTCCATAAAGTCCCTTCTCCTCACCCAAAACCGCTTCTCCGGCACAATCCCCACCGACTTCTTCTCCACCTTAAACTCCCTCAAGAAACTTTGGCTCTCAGGCAACAACTTCTCTGGTGAAATCCCACAATCCCTAACACAACTCAAACTCTTGAAAGAACTCCACCTCGAATACAACTCGTTCTCAGGCCAGATACCAAACTTCAACCAAGATCTGAAGTCGCTGGATTTGTCCAACAACAAACTCCAAGGTGCAATTCCTGTAAGCTTGGCAAGGTTCGGCCCTAACTCTTTCGCAGGAAATGAAGGTCTCTGTGGTAAGCCCTTAGAGAAGACTTGTGGTGATGATGATGGGTCTTCTTTGTTTTCTCTTCTAAGTAATGTTAACGAGGAAAAATACGATACGAGTTGGGCGACGAAGGTGATTGTAATATTGGTTATAGCAGTGGTGGCGGCAATGATATTTCTGTTCGTGAAGAGGAGTCGGAGGGGGGATGGGGAGTTGAGGGTGGTGAGCAGGAGCAGGAGCAACAGCACAGAGGAGGTATTGATGGTGCAGGTACCTAGCATGAGGGGGGGCGTAGGAGATAAGAAGAAGGAAGGAAATAAAAGAGGGGATATTGTGATGGTGAATGAGGAGAGGGGCGTATTTGGGCTTCAGGATTTGATGAAGGCGTCAGCGGAGGTGCTAGGGAATGGGGGGTTGGGATCAATGTACAAGGCGATGATGGGGACAGGGTTGTGCGTGGTGGTGAAGAGGATGAGGGAGATGAATAAGATCGGGAAGGACGTGTTTGACGCTGAGATGAGGCAGTTCGGGAGGATACGACACCGGAATATCATCACGCCACTCGCTTACCATTACCGAAGGGAGGAGAAGCTCTTTATTACTGAGTACATGCCCAAGGGAAGCTTGTTGTATGTCTTGCATGGTGACAGAGGAACATCCCATTCTGAGTTAACTTGGCCTACACGTTTGAACATTGTTAAGGGAATTGCAAGAGGGTTGAAATTCCTTTACTCTGAATTTTCCACCTACGACCTGCCCCACGGGAACCTCAAGTCCAGCAACGTTCTTCTAACTGATGATTACGAGCCTCTCTTGAGTGACTACGCCTTTCAGCCACTGATCAACCCCAAGGTCTCCGTGCAGGCATTGTTCGCCTTCAAATCCCCAGATTTTGTTCAGAATCAGAAGGTTTCGCAGAAGACCGATGTTTACTGCCTCGGTGTCATCATTCTTGAGATCATCACAGGGAAGTTCCCTTCCCAGTATCACAGCAATGGCAAGGGTGGCACTGATGTTGTGCAATGGGCCTTCACCGCAATTTCTGAGGGAACAGAAGCAGAGTTGATCGATTCGGAGTTACCAAACGACGCGAATTCGCGCAAGAACATGCTGCATCTTCTACACATTGGGGCTTGTTGCGCTGAGAGCAACCCTGAACAAAGACTAAACATGAAGGAAGCTGTTAGAAGGATAGAGGAGGTACAGGTTTAA 1848 0.4962 MAAAVRIHHHLSFLFLFLFFISFSCGTETDSLLHLKKSLTNSDRSLSSWIPNISPCSGTWLGVVCFDNTITGLHLSDLGLSGSIDVDALVEIRSLRTLSFINNSFSGPIPNFNKLGSIKSLLLTQNRFSGTIPTDFFSTLNSLKKLWLSGNNFSGEIPQSLTQLKLLKELHLEYNSFSGQIPNFNQDLKSLDLSNNKLQGAIPVSLARFGPNSFAGNEGLCGKPLEKTCGDDDGSSLFSLLSNVNEEKYDTSWATKVIVILVIAVVAAMIFLFVKRSRRGDGELRVVSRSRSNSTEEVLMVQVPSMRGGVGDKKKEGNKRGDIVMVNEERGVFGLQDLMKASAEVLGNGGLGSMYKAMMGTGLCVVVKRMREMNKIGKDVFDAEMRQFGRIRHRNIITPLAYHYRREEKLFITEYMPKGSLLYVLHGDRGTSHSELTWPTRLNIVKGIARGLKFLYSEFSTYDLPHGNLKSSNVLLTDDYEPLLSDYAFQPLINPKVSVQALFAFKSPDFVQNQKVSQKTDVYCLGVIILEIITGKFPSQYHSNGKGGTDVVQWAFTAISEGTEAELIDSELPNDANSRKNMLHLLHIGACCAESNPEQRLNMKEAVRRIEEVQV 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01676 615 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Gma15g01676 615 Gene3D Phosphorylase Kinase; domain 1 308 415 - -
Gma15g01676 615 Gene3D Transferase(Phosphotransferase) domain 1 416 615 - -
Gma15g01676 615 PANTHER LRR RECEPTOR-LIKE KINASE 8 615 - -
Gma15g01676 615 ProSiteProfiles Protein kinase domain profile. 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01676 615 Gene3D Ribonuclease Inhibitor 25 185 IPR032675 -
Gma15g01676 615 Gene3D Ribonuclease Inhibitor 186 231 IPR032675 -
Gma15g01676 615 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Gma15g01676 615 Pfam Protein kinase domain 344 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01676 615 SUPERFAMILY L domain-like 28 209 - -
Gma15g01676 615 Pfam Leucine Rich Repeat 188 214 IPR001611 GO:0005515
Gma15g01676 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 615 - -
Gma15g01676 615 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Gma15g01676 615 SUPERFAMILY Protein kinase-like (PK-like) 344 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01676 Gma-Chr15 17461134 17464031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01676 11 613 Receptor kinase-like Gene Family AT3G42880 49.921 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma15g01676 Pkinase 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01676 - - gmx:100790660 1165.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01676 15 17461134 17464031 Gma15g01676 15 17461134 17464031 ECH
Gma17g00451 17 3704474 3706915 Gma15g01676 15 17461134 17464031 PCT
Gma13g00918 13 23326800 23329243 Gma15g01676 15 17461134 17464031 PCT
Gma15g01676 15 17461134 17464031 Gma17g00451 17 3704474 3706915 PCT
Gma15g01676 15 17461134 17464031 Gma13g00918 13 23326800 23329243 PCT