Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01667 atgtatatagatgctgctgaagttatgcttgaggatgatgttgcctCAAATAGAGCTATTGGTTCGTATGGAGCTAGTATTATTCAACATCAAACAGAGAAACAAAAGTTTTCTGTTTTGACTCATTGCAATACTGGAAGTCTAGCCACAGCTGGATATGGTACTGCTCTGGGTGTGATCCGTGCACTTCACAGTGCTGGAGTTCTAGAAAGGGTTTATTGCACAGAAACACGCCCATTCAATCAAGGATCTAGACTCACTGCTTTTGAGTTGGTGCATGAAAAATTATCAGGAACTCTTATTTCCAATTCTGCTGCAGCTGCATTAATGAAAGCAGGACATGTGGATGCTGTTGTTGTTGGGGCAGATCGTGTTGCATCAAACGGTGACACAGCCAACAAAATAGGAACCGACAGCGTTGCCTTGTCTGCTAAGTTTCATAATATTGCTGCCTCAGGAATTTCCGTCTGGAACCCAGCTTTTGATGTTACTCCTGCTAATCTAATATCCGGGATCATCACTGAGAAGGGTGTCGTTACAAAGACAACTGCTGGTGGTGCATTTGACATCAAAGCTTTCGTACAGAAAACTGGTTAA 597 0.3953 MYIDAAEVMLEDDVASNRAIGSYGASIIQHQTEKQKFSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERVYCTETRPFNQGSRLTAFELVHEKLSGTLISNSAAAALMKAGHVDAVVVGADRVASNGDTANKIGTDSVALSAKFHNIAASGISVWNPAFDVTPANLISGIITEKGVVTKTTAGGAFDIKAFVQKTG 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01667 198 Gene3D - 70 150 IPR042529 -
Gma15g01667 198 Pfam Initiation factor 2 subunit family 3 149 IPR000649 GO:0044237
Gma15g01667 198 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 2 149 - -
Gma15g01667 198 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 148 195 - -
Gma15g01667 198 Gene3D - 1 69 IPR027363 -
Gma15g01667 198 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 2 149 - -
Gma15g01667 198 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 148 195 - -
Gma15g01667 198 Gene3D - 151 197 IPR042529 -
Gma15g01667 198 SUPERFAMILY NagB/RpiA/CoA transferase-like 2 182 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01667 Gma-Chr15 17309071 17310740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01667 2 196 Eukaryotic Initiation Factors Gene Family AT2G05830 60.924 2.15e-94 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01667 K08963 - gmx:100799311 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01667 15 17309071 17310740 Gma15g01667 15 17309071 17310740 ECH
Gma15g01667 15 17309071 17310740 Gma09g00646 09 7340073 7361548 GST