Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01660 ATGACCCTTATGAAAACCCTATGGAAATCAATCTTCCCCGGTTGTTACAAGGGTGAATATCCCTCTCCAAAGCCAAAGAAAGTGGTGGCTACAAAGCCAAATTCTTCACACAGAATTTCTGTGACGGATTTGAGTTATCCAAGCACGACTCTTTCGGAGGATCTGTCAATTTCTCTAGCGGGAACCAACCTCCATGTTTTCTCACTCGCTGAGCTCAAGATTATTACTCAACAATTCTCTTCTAGCAATTTTCTTGGAGAAGGTGGGTTCGGACCCGTGCATAAGGGGTTCATTGATGACAAGCTTAGGCATGGCCTCAAGGCTCAACCGGTGGCTGTTAAGCTCTTGGACTTGGATGGCTCGCAGGGCCACAAAGAGTGGTTGACTGAAGTTGTTTTTCTGGGGCAACTAAGGCATCCACATCTCGTGAAGCTGATAGGATACTGCTGTGAAGAAGAACACAGGGTTTTAGTATATGAATATTTACCAAGAGGAAGCTTGGAGAATCAATTATTTAGAAGATTCTCGGCATCACTTTCAtggtcaacgagaatgaaaattgctgttggagctgcgaagggtttagcatttcttcatgaagctgagaagccagtcatctatagagatttcaaagcttccaacatcttgttaggcTCTGATTAcaatgcaaagctatctgattttgggttggcaaaagacggtcccgaaggagatgatactcacgtttcaacccgagttatgggtacACACGGCTACGCAGCTCCAGAATATATCATGACAGGTCACTTGACAGCAATGAgtgacgtgtatagttttggagtagtgctgttggagCTGCTAACAGGGAGAAGGTCAGTGGACAAAAATCGCCCTCCAAGGGAGCAAAACCTAGTGGAGTGGGCAAGGCCAATGCTAAATGACTCTAGGAAACTCAGCAGAATAATGGATCCTAGACTTGAAGGCCAATATTCTGAAATGGGGACAAAAAAAGCAGCAGCATTGGCTTACCAATGCCTCAGCCACAGACCAAGGAGCAGACCCTCAATGAGCACAGTGGTCAAGACCCTTGAGCCACTCCAAGATTTTGATGACATTCCAATTGGAACATTTGTTTACACAGCTCCACCGGATAATAATGAAATGCATAGTGCAAAGGATCAATGTGAGACACCTAAGAGGAGGGAAAATAATAATAACAATGGTCACCTTCATAGGAATGGCCACAGGCATCATCCACTTAAATCCCCCAAGACCCCTAGGCCACAATCACAATCACAATCACGTTCAAATGATCACAAACACCGAAATGGAAGAGGAAGTGGATCAAATTCTCCTCCATCACATGGGAAAATTAGGCAAGGAGTTCTTGCCTATTAG 1377 0.3704 MTLMKTLWKSIFPGCYKGEYPSPKPKKVVATKPNSSHRISVTDLSYPSTTLSEDLSISLAGTNLHVFSLAELKIITQQFSSSNFLGEGGFGPVHKGFIDDKLRHGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRVLVYEYLPRGSLENQLFRRFSASLSWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLGSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKNRPPREQNLVEWARPMLNDSRKLSRIMDPRLEGQYSEMGTKKAAALAYQCLSHRPRSRPSMSTVVKTLEPLQDFDDIPIGTFVYTAPPDNNEMHSAKDQCETPKRRENNNNNGHLHRNGHRHHPLKSPKTPRPQSQSQSRSNDHKHRNGRGSGSNSPPSHGKIRQGVLAY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01660 458 Gene3D Phosphorylase Kinase; domain 1 39 161 - -
Gma15g01660 458 MobiDBLite consensus disorder prediction 370 458 - -
Gma15g01660 458 Gene3D Transferase(Phosphotransferase) domain 1 162 366 - -
Gma15g01660 458 PANTHER OS01G0588500 PROTEIN-RELATED 23 414 - -
Gma15g01660 458 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Gma15g01660 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Gma15g01660 458 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01660 458 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 23 414 - -
Gma15g01660 458 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Gma15g01660 458 MobiDBLite consensus disorder prediction 382 402 - -
Gma15g01660 458 CDD STKc_IRAK 85 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01660 Gma-Chr15 17195070 17198705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01660 65 393 Glycoside Hydrolase AT3G07070 50.000 4.13e-102 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma15g01660 PK_Tyr_Ser-Thr 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01660 - - gmx:100783759 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01660 15 17195070 17198705 Gma09g00640 09 7260471 7264012 GST
Gma17g00460 17 3792470 3795039 Gma15g01660 15 17195070 17198705 PCT
Gma13g00908 13 23232630 23235097 Gma15g01660 15 17195070 17198705 PCT
Gma15g01660 15 17195070 17198705 Gma17g00460 17 3792470 3795039 PCT
Gma15g01660 15 17195070 17198705 Gma13g00908 13 23232630 23235097 PCT