Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01646 ATGATGAATGGAAGGAACAGGTTCCCCTTTACCCCATCACAGTGGCAAGAGCTTGAACACCAAGCTCTCATCTACAAGTACATGGCTTCAGGCATTTCCATTCCACCTGATCTTCTCTTCACCATAAAAAGGAGCTATTTTGATTCCCCTCTGTCCTCAAGGCTTTTGCCTAACCAGCCACAGCACTTTGGATGGAACTACCTTCAGATGGGTTTGGGAAGAAAAATAGACCCTGAGCCAGGTAGGTGTAGAAGAACTGATGGCAAGAAATGGAGATGCTCCAAAGAAGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGGAAGAATCGTTCAAGAAAGCCTGTGGAAGTTTTAAAATCAACAACAACACCATCATCATCAACAACAAACTCAAATGCTTCTTCTACACAACAAGCAATCTCATCAATCACCAAAATTAATAGCACTCTCTCACCTCTTGCATCATCTGAGACTCACCAACACCACCACTATCCTCAACACTATGGCTCCTTTCTCTATCATCATCACCCTCCTTCAAGGTCCTCTGGCATTGGCTTGTCTTTTGAAGACAACAGTGCTCCCTTGTTTCTTGACACTGGCTCATGCTCTCAGTCCAACACAGACTGCAGGAGTAGGTATGTTTATGGAGAGAAAGAGGAGGTGGATGAGCATGCTTTCTTCACAGAACCTTGTGGTGTTATGAAAAGCTTCTCTGCTTCCTCTATGGATGACTCATGGCAACTCACACCATTGACTATGAGCTCCTCATCTTCATCTTCCAAGCAGAGGAGTTCCTTTGGCTTGTCCAGTGATTACTCTTGCTTGCAACTTCAGAGCCACTCAAAGCAGCAGCAGCAAGAGCATCATCAAGATCAGGGTTGCTACATGTTTGGTGCTGGTCAAGTTGTGAAAGAAGAACCTCAGAAAACGGTTCATCGCTTCTTTGATGAATGGCCACACAAAGGAAGAGAAGGCTCTTGGCTTGATTTGGATGACAAATCTTCCACAACCCAACTTTCAATTTCCATCCCCACATCTTCTCATGATTTTTCAACTTTCAGTTCCAGAACCCACCATGATGGTTGA 1098 0.4463 MMNGRNRFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIKRSYFDSPLSSRLLPNQPQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKSTTTPSSSTTNSNASSTQQAISSITKINSTLSPLASSETHQHHHYPQHYGSFLYHHHPPSRSSGIGLSFEDNSAPLFLDTGSCSQSNTDCRSRYVYGEKEEVDEHAFFTEPCGVMKSFSASSMDDSWQLTPLTMSSSSSSSKQRSSFGLSSDYSCLQLQSHSKQQQQEHHQDQGCYMFGAGQVVKEEPQKTVHRFFDEWPHKGREGSWLDLDDKSSTTQLSISIPTSSHDFSTFSSRTHHDG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01646 365 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma15g01646 365 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma15g01646 365 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Gma15g01646 365 Pfam WRC 78 120 IPR014977 -
Gma15g01646 365 PANTHER GROWTH-REGULATING FACTOR 5 4 341 - -
Gma15g01646 365 MobiDBLite consensus disorder prediction 105 143 - -
Gma15g01646 365 PANTHER - 4 341 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gma15g01646 365 MobiDBLite consensus disorder prediction 120 143 - -
Gma15g01646 365 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01646 Gma-Chr15 16998359 17000758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01646 7 120 GRF Transcription Factor Family AT3G13960 71.053 1.00e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gma15g01646 WRC 7.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01646 - - gmx:100781613 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01646 15 16998359 17000758 Gma15g01646 15 16998359 17000758 ECH
Gma15g01646 15 16998359 17000758 Gma09g00629 09 7094053 7096039 GST
Gma17g00473 17 3893586 3895572 Gma15g01646 15 16998359 17000758 PCT
Gma13g00896 13 23134795 23136685 Gma15g01646 15 16998359 17000758 PCT
Gma15g01646 15 16998359 17000758 Gma17g00473 17 3893586 3895572 PCT
Gma15g01646 15 16998359 17000758 Gma13g00896 13 23134795 23136685 PCT