Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01638 ATGGAAACGAAGGACGACAGTGCTGAAAAAGAAGAAGCTTGGTCTTCTCATGAAGACGAAATTCTTTTGAACTATGTTCAAGTCCGTGGAGAAGGAAATTGGAGAAACCTTCCTAAAAGAGCTGGCTTGAAACGATGTGGTGAGAGTTGCAAACAACGATGGTTGAACTATCTTAAGCCAACCATATCTAGAGGAAACATTTCTTTAGATGAACATGAACTCATAATCAGACTGCATAAGCTCTTGGGGAATAGATGGTCTATCATTGCTGGACGATTACCAGGACGCACCGAAGAAGAGATCAAGAACTACTGGAATACCTATTTGAGAAAGGAGGCAGAAGAGAACCAAAACAATAAGAACGAATTTCCAAGCACAAGTATGACAACAACTAGCATGTCTAGTGTTCAATCTCCATGGTACTCCGAAAATTCCGTAGGTACCAATCCCACGGAATCTCCAAATCCTGTGATTAGACCTAAAGTTGTGAGGTTATCTAAGTTTAATTTGTCGTGCCAAGACAGGTAG 528 0.4091 METKDDSAEKEEAWSSHEDEILLNYVQVRGEGNWRNLPKRAGLKRCGESCKQRWLNYLKPTISRGNISLDEHELIIRLHKLLGNRWSIIAGRLPGRTEEEIKNYWNTYLRKEAEENQNNKNEFPSTSMTTTSMSSVQSPWYSENSVGTNPTESPNPVIRPKVVRLSKFNLSCQDR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01638 175 Gene3D - 67 136 - -
Gma15g01638 175 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 171 - -
Gma15g01638 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 58 IPR017930 -
Gma15g01638 175 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Gma15g01638 175 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 171 - -
Gma15g01638 175 MobiDBLite consensus disorder prediction 115 158 - -
Gma15g01638 175 CDD SANT 68 109 IPR001005 -
Gma15g01638 175 Gene3D - 12 63 - -
Gma15g01638 175 SMART sant 63 111 IPR001005 -
Gma15g01638 175 SMART sant 10 60 IPR001005 -
Gma15g01638 175 SUPERFAMILY Homeodomain-like 12 105 IPR009057 -
Gma15g01638 175 MobiDBLite consensus disorder prediction 119 155 - -
Gma15g01638 175 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Gma15g01638 175 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Gma15g01638 175 CDD SANT 13 58 IPR001005 -
Gma15g01638 175 Pfam Myb-like DNA-binding domain 64 109 IPR001005 -
Gma15g01638 175 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01638 Gma-Chr15 16868594 16870632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01638 10 112 MYB Transcription Factor Family AT3G13540 64.078 1.22e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma15g01638 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01638 K09422 - gmx:778159 353.984