Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01624 ATGCTTACGTGCATAGCACGTCCGAAGAAACCCGGTGGCGACTCGGCAAGCGACGATCCGAGTTCGCGGAGCCAGCAGGGAGTGAAGTCGCTGACGTGTCAGCTGAAGGAGATGGCGCTGAAGGCGTCGGGAGCGTACAAGCAGTGCGGCCCGTGCGCGACGGCGCCGAGTAGGCCGAGTCGCAGCGGAACCGAGTCGGACTCGGAGTCGTCGTCGTCCCGGCGGCGGTGGGGGAAGGAGCTGGAGGCGCGGCTGAAGGGGATATCGAGCGGGGAAGGGACGCCGAGCTCGAGCGGGAGGAGGGTGGTGATGCTGCTCGAGGACGAGGAGGAGCCGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATCTCCTTTGTGTCGCTTCCACGTGGCGGGAACCATCTCAAACGGATACGATTCAGTCGCGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTGATGGAACTTTACAATGTTCAAAGGCTTGATCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGTTCAAAGCGTGAATCAATAGAAGATTTCCCAGTGACACCTCCACTGAGCAGGGAAAGGCCACCTTGTAATCTATACCGTGCCGGGGGAAGAGGAGGAGGAGGCATGGGAATGGGGTACTCATCCTCAGATTCCTTTGATCACACCTCAATGCAATCATCCCGGCATTACTATGACCCCAATGGTGTGAACTCAACCCCAAAGGCTTCCACCATTAGTGCTGCTGCAAAGACAGATATCTCATCAATAATGGATGCTGATGCTTCCATAAGAAGTAGTTCATCCAGGGAAGCTGATCGCTCTGGGGATCTTTCAATCAGCAATGCCAGTGACTTTGACAATGAATGGGTTGAGCAGGATGAGCCTGGGGTTTACATCACCATCAGAGCTCTCCTGGGTGGCAAAAAGGAGCTCAGACGAGTCAGGTTCAGTCGAGAAAAGTTTGGGGAGATGCATGCTAGACTATGGTGGGAAGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1074 0.5466 MLTCIARPKKPGGDSASDDPSSRSQQGVKSLTCQLKEMALKASGAYKQCGPCATAPSRPSRSGTESDSESSSSRRRWGKELEARLKGISSGEGTPSSSGRRVVMLLEDEEEPKEWVAQVEPGVLISFVSLPRGGNHLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRLDRQAFPLPTPPRSEDESSKRESIEDFPVTPPLSRERPPCNLYRAGGRGGGGMGMGYSSSDSFDHTSMQSSRHYYDPNGVNSTPKASTISAAAKTDISSIMDADASIRSSSSREADRSGDLSISNASDFDNEWVEQDEPGVYITIRALLGGKKELRRVRFSREKFGEMHARLWWEENRARIHEQYL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01624 357 Pfam Transcription factor regulating root and shoot growth via Pin3 302 356 IPR013591 -
Gma15g01624 357 Pfam Transcription factor regulating root and shoot growth via Pin3 113 167 IPR013591 -
Gma15g01624 357 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 357 - -
Gma15g01624 357 MobiDBLite consensus disorder prediction 1 30 - -
Gma15g01624 357 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 357 IPR044532 -
Gma15g01624 357 MobiDBLite consensus disorder prediction 177 211 - -
Gma15g01624 357 Pfam Transcription factor BRX N-terminal domain 26 52 IPR027988 -
Gma15g01624 357 MobiDBLite consensus disorder prediction 48 77 - -
Gma15g01624 357 ProSiteProfiles BRX domain profile. 302 357 IPR013591 -
Gma15g01624 357 ProSiteProfiles BRX domain profile. 113 168 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01624 Gma-Chr15 16118282 16126070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01624 1 357 Major Intrinsic Protein MIP AT1G31880 42.674 4.07e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01624 - - gmx:100791360 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01624 15 16118282 16126070 Gma15g01624 15 16118282 16126070 ECH
Gma17g00482 17 3964213 3969029 Gma15g01624 15 16118282 16126070 PCT
Gma13g00884 13 23053397 23058763 Gma15g01624 15 16118282 16126070 PCT
Gma15g01624 15 16118282 16126070 Gma17g00482 17 3964213 3969029 PCT
Gma15g01624 15 16118282 16126070 Gma13g00884 13 23053397 23058763 PCT