Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01615 ATGAAGAAAGCAGGGAGCATAAGCTCTGGTCTCAAACTCACAGTTCCTGCTGCATCTGATCGTGATTCATTTACAAAGTTCCGGTCTGAGCCTGAAAGTGGAACGTTTAAGGCTGGTGACTTGCTTGTCAATAATGAAGGAGTTCGAATTGTCTCTGAGAATGAAGTGGAAGCTCCACCCCCGATCAGGCCACAAGATAACCAGTTAAGTTTGGCAGACATTGATACAATCAAAGTGATTGGAAAAGGAAATGGAGGGGTAGTGCAATTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTGAAGGAAATCCAAATGCCTATTGAGGAGCCTATCCGCAGGCAGATAGCACAAGAGCTAAAAATCAATCAATCAGCACAATGTCCCTATGTTGTTGTTTGCTACAATTCATTCTATCATAACGGTGTCATATCAATCATTTTAGAGTACATGGACGGAGGGTCCTTGGAAGATCTTCTGAGCAAAGTTAAAACAATTCCAGAGTCGTATCTTTCTGCCATCTGCAAGCAGGTGCTCAAGGGTTTAATGTATCTTCACTATGCAAAACATATTATCCATAGGGACTTAAAACCTTCTAATCTGCTGATAAATCATAGAGGGGAGGTAAAGATTACTGACTTTGGTGTAAGTGTAATCATGGAAAATACATCTGGTCAAGCAAATACATTCATTGGCACATACAGCTATATGTCGCCAGAAAGAATCATTGGTAACCAGCATGGCTACAACTACAAAAGTGATATATGGAGCTTGGGACTGATTTTGCTCAAGTGTGCTACGGGGCAGTTTCCATATACACCACCGGATCGTGAAGGGTGGGAAAATATTTTCCAGCTTATTGAAGTCATTGTGGAAAAACCTTCTCCCAGTGCTCCATCAGATGATTTTTCTCCAGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCAGGGGATAGACCGTCAGCTCGGGACCTTATAAATCATCCTTTTATCAACATGCATGAGGACTTGAACAACACAGTATGTTCCGATCCTGGACTTTATTCAAAGATATTACCTAAACTACAAGTAAATGTGGGATGTGCTCGTTTGCAACTTTCCAAGTTTCCATACTAA 1128 0.4069 MKKAGSISSGLKLTVPAASDRDSFTKFRSEPESGTFKAGDLLVNNEGVRIVSENEVEAPPPIRPQDNQLSLADIDTIKVIGKGNGGVVQLVQHKWTNQFFALKEIQMPIEEPIRRQIAQELKINQSAQCPYVVVCYNSFYHNGVISIILEYMDGGSLEDLLSKVKTIPESYLSAICKQVLKGLMYLHYAKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMENTSGQANTFIGTYSYMSPERIIGNQHGYNYKSDIWSLGLILLKCATGQFPYTPPDREGWENIFQLIEVIVEKPSPSAPSDDFSPEFCSFISACLQKNPGDRPSARDLINHPFINMHEDLNNTVCSDPGLYSKILPKLQVNVGCARLQLSKFPY 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01615 375 SMART serkin_6 74 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01615 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Gma15g01615 375 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 4 343 - -
Gma15g01615 375 Gene3D Transferase(Phosphotransferase) domain 1 154 348 - -
Gma15g01615 375 SUPERFAMILY Protein kinase-like (PK-like) 58 339 IPR011009 -
Gma15g01615 375 Gene3D Phosphorylase Kinase; domain 1 50 153 - -
Gma15g01615 375 CDD PKc_MAPKK_plant_like 72 339 - -
Gma15g01615 375 ProSitePatterns Protein kinases ATP-binding region signature. 80 103 IPR017441 GO:0005524
Gma15g01615 375 PANTHER MAP KINASE KINASE 4 343 - -
Gma15g01615 375 Pfam Protein kinase domain 76 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01615 375 ProSiteProfiles Protein kinase domain profile. 74 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01615 Gma-Chr15 15982117 15987448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01615 1 330 MAP Kinase Kinase Gene Family AT4G29810 64.497 3.17e-158 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Gma15g01615 Pkinase 2.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01615 K20603 - gmx:100789241 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01615 15 15982117 15987448 Gma15g01615 15 15982117 15987448 ECH
Gma15g01615 15 15982117 15987448 Gma09g00605 09 6680925 6694303 GST
Gma17g00495 17 4055042 4059674 Gma15g01615 15 15982117 15987448 PCT
Gma13g00871 13 22918740 22924036 Gma15g01615 15 15982117 15987448 PCT
Gma15g01615 15 15982117 15987448 Gma17g00495 17 4055042 4059674 PCT
Gma15g01615 15 15982117 15987448 Gma13g00871 13 22918740 22924036 PCT