Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01614 ATGGAGGAAATAACTTCGACGGTTGCAGTGCCATTCACACTTGGGAATTTAATACAAAAGGAGCAAGCAGTGACAACCCACATGGAGATAACTGGTCTCAAACTCAGGGCAAATACATCATCATCTTTGATATTAAATCCTGCAGTTGAAAGTGAAAAGCACACAGATATTGGGCCACAAACCCAAATTGAAGTGTCTTCAGAGGCAAAGGAGAATCCCGTTGGAGCTGGCCTTGTCTCAGAAATGGTTAGTCAAGGAGACAATAATGGTTTATATTCTGAAAGTCTAAATCAGGCAATAAAAGAGAATGAATCATTGTTAGTTAAGGATTCTCAGTGTGATCGGCATATCTCTCAATCTGCTGCTGGTGGCAAAAGTAGTCCTTGTAGGGAGGAATCTTCTGTTTTGAGGACTAATTGTGAAAGAAATTCACCTATTACCATCAAGGTTGATGATAACATAATTGATGGAAAGTCTGGTTCGACCAAGCTGCCACATGCTAGGGAACATGAAAGTGATGATGGAAGTGGATCAGATGAGTCTAATAAGAAAACATTTGATGTGCGTTGTGAGATGCCTGAGAAGCCAACATGCTTGGAATTGAGTGGTAATACTACTAGTACTACCCCACTTTGGGGTTGCTCATCAGTTTGTGGAAGGAGAAAGGAGATGGAAGATGCTATTGCTGTTAAGCCTCACCTTTTTCAAGTCACTTCAAGGATGTTAATGGATGATCATGTGAGTGAAAACACAAAATACTCACCAGTCCACTTTTTTGGTGTCTATGATGGACATGGCGGCATTCAGGTTGCCAATTACTGTCGGGAACATCTTCATTCAGTGTTGGTTGATGAGATAGAAGCTGCAAAGTCAAGTTTGGATGGAAAGAAAGAGATGGACAACTGGGAGGAGCAATGGAAAAAAGCATTCTCCAATTGCTTTCACAAAGTGGATGATGAGGTTGGAGGAGTTGGTGAAGGTAATGGTGTTAGTGTTGAACCTCTTGCTTCTGAGACTGTTGGCTCCACTGCTGTAGTTGCCATTTTGACTCAAACACACATAATAGTTGCAAACTGTGGAGATTCAAGAGCTGTCTTGTGTCGCGGAAGAGAAGCATTGCCATTGTCTGATGATCACAAACCAAATAGAGACGATGAATGGGAAAGGATAGAAGCTGCAGGGGGAAGGATCATACAATGGAATGGGTACCGAGTTCTAGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGGTACTTGAAACCGTGGGTAATTCCAGAGCCAGAAGTGAAGTGTCTCCAATTAGACAAAAACGACGAATGCCTCATTCTGGCCAGTGATGGTTTATGGGATGTCATGACAAACGAAGAAGCCTGTGACATTGCACGAAAGCGAATCCTTCTTTGGCATAAGAAGAATGTCAACAACTCATCATCAGAACAAGGTCAAGAAGGAGTTGATCCTGCAGCTCAGTATGCCGCAGAGTATCTTTCTAGACTTGCCCTCCAAAGAGGAACCAAAGATAACATCTCTGTCATAGTTGTAGACTTGAAGCCTCAGAGAAAAATCAAGAAAAAAGAATAA 1584 0.4223 MEEITSTVAVPFTLGNLIQKEQAVTTHMEITGLKLRANTSSSLILNPAVESEKHTDIGPQTQIEVSSEAKENPVGAGLVSEMVSQGDNNGLYSESLNQAIKENESLLVKDSQCDRHISQSAAGGKSSPCREESSVLRTNCERNSPITIKVDDNIIDGKSGSTKLPHAREHESDDGSGSDESNKKTFDVRCEMPEKPTCLELSGNTTSTTPLWGCSSVCGRRKEMEDAIAVKPHLFQVTSRMLMDDHVSENTKYSPVHFFGVYDGHGGIQVANYCREHLHSVLVDEIEAAKSSLDGKKEMDNWEEQWKKAFSNCFHKVDDEVGGVGEGNGVSVEPLASETVGSTAVVAILTQTHIIVANCGDSRAVLCRGREALPLSDDHKPNRDDEWERIEAAGGRIIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVKCLQLDKNDECLILASDGLWDVMTNEEACDIARKRILLWHKKNVNNSSSEQGQEGVDPAAQYAAEYLSRLALQRGTKDNISVIVVDLKPQRKIKKKE 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01614 527 Pfam Protein phosphatase 2C 215 510 IPR001932 -
Gma15g01614 527 SMART PP2C_SIG_2 242 517 IPR001932 -
Gma15g01614 527 SMART PP2C_4 201 515 IPR001932 -
Gma15g01614 527 ProSitePatterns PPM-type phosphatase domain signature. 258 266 IPR000222 GO:0043169
Gma15g01614 527 CDD PP2Cc 213 517 IPR001932 -
Gma15g01614 527 SUPERFAMILY PP2C-like 198 519 IPR036457 -
Gma15g01614 527 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 107 527 - -
Gma15g01614 527 MobiDBLite consensus disorder prediction 162 183 - -
Gma15g01614 527 ProSiteProfiles PPM-type phosphatase domain profile. 211 517 IPR001932 -
Gma15g01614 527 MobiDBLite consensus disorder prediction 118 137 - -
Gma15g01614 527 PANTHER ALPHABET, ISOFORM E-RELATED 107 527 - -
Gma15g01614 527 Gene3D - 202 527 IPR036457 -
Gma15g01614 527 MobiDBLite consensus disorder prediction 151 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01614 Gma-Chr15 15978733 15981338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01614 173 526 PP2C-type Phosphatase Gene Family AT4G26080 56.944 1.42e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01614 K14497 - gmx:100812974 1030.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01614 15 15978733 15981338 Gma15g01614 15 15978733 15981338 ECH
Gma15g01614 15 15978733 15981338 Gma09g00603 09 6675535 6678141 GST
Gma17g00496 17 4060218 4063782 Gma15g01614 15 15978733 15981338 PCT
Gma13g00870 13 22916183 22918512 Gma15g01614 15 15978733 15981338 PCT
Gma15g01614 15 15978733 15981338 Gma17g00496 17 4060218 4063782 PCT
Gma15g01614 15 15978733 15981338 Gma13g00870 13 22916183 22918512 PCT