Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01603 ATGGAACCTCGCGTTGGGAATAAGTTTCGGCTTGGCCGTAAGATTGGTAGCGGATCGTTTGGAGAGATCTATTTAGGTACTAATATTCAAACTAATGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTATATGAGTCCAAGTTGTACAGAGTTCTCCAGGGAGGAACTGGAATTCCAGATGTTAGATGGTTTGGAGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGCAGTAGAAAGCTCTCACTAAAGACAGTTCTCATGCTTGCTGATCACATGATCAACCGTGTTGAGTTTGTTCATTCTAAATCATTTCTTCATCGGGATATCAAACCAGATAATTTCCTCATGGGCTTGGGAAGGCGGGCAAACCAGGTTTACTGTATTGATTTTGGTTTGGCAAAGAAATATAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAACAAGAATTTAACTGGGACTGCTAGATACGCGAGTATGAATACCCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTGGAGTCTGTTGGTTTTGTCTTGATGTATTTCTTGAGAGGAAGTCTCCCTTGGCAAGGACTTAAAGCAGGAACAAAGAAACACAAGTACGAGAGAATCAGTGAAAAAAAGGTTTCTACCTCAATTGAGGCCTTGTGTCGAGGTTATCCAACAGAATTTGCATCATACTTCCATTACTGCCGCTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTTTGCGACTTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGATTGGACAATCTTGAAGTATCAGCAATCACAgctagctgctcctccagcacgtgccattGGTCCTAATGTTGGAACTAGTTCTGCAATGCCACCGGCTGTGACTAATGCTGATAGACAGACAGGAGAGGAAGAAGGGCGACCTCCTGGTCTGGTTTCAGGGGATTCCACAAGGCGAAGAATGTCAGGGCCCATCACAAACTCTGTAAATATTTCAAAGCAGAAAAATCCAGTCACTACGGATGCTGCCCTTAATAAGGAGGCCATGTTATCAAGGCCCAATGTCTTGGGGCAGTCAAGTGGATCAAGGCGAGCTGCGGTTTCTAGTAGGCGTGATGCATTTGTTGGTTCGGATTTGGATCTTCGTACTCGTTCTACTGAGGCTAACCCTGGAACAGCAATTAAAACATCATCTGCGAGAAATGCTTCTCATGTCAAGAACTATGAAACTGCAATCAAGGGCATTGAGGGTTTGCAATTAGAAAATGATGAGAAGGCACATTATTGA 1371 0.4128 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRVLQGGTGIPDVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADHMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESVGFVLMYFLRGSLPWQGLKAGTKKHKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFCDLFIREGFQFDYVFDWTILKYQQSQLAAPPARAIGPNVGTSSAMPPAVTNADRQTGEEEGRPPGLVSGDSTRRRMSGPITNSVNISKQKNPVTTDAALNKEAMLSRPNVLGQSSGSRRAAVSSRRDAFVGSDLDLRTRSTEANPGTAIKTSSARNASHVKNYETAIKGIEGLQLENDEKAHY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01603 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gma15g01603 456 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 438 IPR030509 GO:0004672|GO:0005524
Gma15g01603 456 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gma15g01603 456 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Gma15g01603 456 Gene3D Transferase(Phosphotransferase) domain 1 1 313 - -
Gma15g01603 456 Pfam Protein kinase domain 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01603 456 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01603 456 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01603 456 MobiDBLite consensus disorder prediction 311 359 - -
Gma15g01603 456 CDD STKc_CK1_delta_epsilon 8 282 - -
Gma15g01603 456 PANTHER CASEIN KINASE-RELATED 1 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01603 Gma-Chr15 15816175 15824258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01603 7 222 EF-hand Containing Proteins AT2G17890 25.000 1.30e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gma15g01603 Pkinase 1.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01603 K02218 - gmx:100784627 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01603 15 15816175 15824258 Gma09g00591 09 6499454 6505351 GST
Gma17g00505 17 4151853 4157886 Gma15g01603 15 15816175 15824258 PCT
Gma13g00859 13 22827070 22833265 Gma15g01603 15 15816175 15824258 PCT
Gma15g01603 15 15816175 15824258 Gma17g00505 17 4151853 4157886 PCT
Gma15g01603 15 15816175 15824258 Gma13g00859 13 22827070 22833265 PCT