Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01581 ATGAAAAAGAAGATCTTAGCATTTGAAAGGCTTCATGACATTGCAGTTGGGACAGCAAAAGGCATTGCTTACTTGCATGAAGAGTGCCAACAGAGAATAATCCACTATGACATCAAACTAGGAAATATTCTCTTGGATGGAAAATTGAATCCTGAAGTTACTGATTTTGGTTTAGCCAAATTTTGCATTAGGAGAAGAAACCTTGGCGTTCAACTTGTTGAAAGCCAGGAGTGGTTTCCAATGTGTATTTGGAAAAGGTTTGATGTTGGAGAATTTCAGAAGTTGATAATAGCATGTGGGATAGAGGAGAAAAATAGGGAGATTACAGAGAGAATGGTTGACGTAGCTCTATCCTTTGTTCAGTATAGGTCAGATTCAAGGCCTATAATGAGTGATGTGGTGAAAATGCTGGAAGGTTCAGTGGAAATGTCGAAAACTTTGAACCCATTTCAGCCATTTATGGATGGGAATTTCACTTCTCATCCGGTCCAAGTGCCACTAACCTACACTACAGATACTAATGGTTTTTCTGATGTGGTAACTGACTCTAGTATTGTACATGTTATTCTTACACTATGA 579 0.3834 MKKKILAFERLHDIAVGTAKGIAYLHEECQQRIIHYDIKLGNILLDGKLNPEVTDFGLAKFCIRRRNLGVQLVESQEWFPMCIWKRFDVGEFQKLIIACGIEEKNREITERMVDVALSFVQYRSDSRPIMSDVVKMLEGSVEMSKTLNPFQPFMDGNFTSHPVQVPLTYTTDTNGFSDVVTDSSIVHVILTL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01581 192 Pfam Protein kinase domain 3 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01581 192 Gene3D Transferase(Phosphotransferase) domain 1 1 81 - -
Gma15g01581 192 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01581 192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 33 45 IPR008271 GO:0004672|GO:0006468
Gma15g01581 192 PANTHER PUTATIVE-RELATED 64 185 - -
Gma15g01581 192 PANTHER PUTATIVE-RELATED 3 62 - -
Gma15g01581 192 PANTHER RUST RESISTANCE KINASE LR10-RELATED 64 185 IPR045874 GO:0004672
Gma15g01581 192 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 62 IPR045874 GO:0004672
Gma15g01581 192 SUPERFAMILY Protein kinase-like (PK-like) 4 170 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01581 Gma-Chr15 15345340 15346060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01581 6 142 Receptor kinase-like Gene Family AT5G38280 30.319 3.47e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma15g01581 Pkinase 1.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01581 - - ccaj:109788995 210.69