Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01575 ATGGGTGTGGGTTGCCCGCCATGTTGGTGCACCGACGATGTGGTGGGCAGCGGCAATGTGGAGGTTTTGGTGAATGGCAGTTTGGTTGGTGTTGGAGGCATAGATGGGTTGGTTGTGGCTCAAATTGAATCACAAAGTTTGCTTTCCTCCCCAAGAATGCCTCTCCGAGTACTCCAAGCAGAGGCTACTTCACCCTCTAATGAGTCACATGCACCACAGCATAAATCCGGATCATCATTGTTTTACATCCTCGGAGGACTAGTTGTGCTCGCCATAGTGTTGATTTTTTTGTATGTAGTTTGGAAGCGAATTAAACGGCCAGCACAGACGATGACAGTTGCAAGTAAAGAGCATCAAGAGTTTGGGAAACATAATGAATCGGCAGAGGTGATGAAGATGATATTTTCATCTAATCAACAGTCAGGGTCCAAGGAGTTCTTTAGTGGGAACCTTCGGACTATTAGCTGCTTTGACTACCAGACATTGAAGAAAGCAACCGAGAATTTCCATCCTGATAATCTTCTTGGAAGTGGTGGATTTGGACCTGTTTACCAGGGAAAGTTGGTAGATGGAAGGCTAGTTGCTGTCAAAAAATTGGCTCTCAACAAATCCCAACAGGGAGAAAAAGAATTTCTGGTAGAGGTGAGAACAATCACTAGTATCCAACACAAAAATCTGGTTCGCCTTCTCGGATGCTGCGTAGATGGGCCTCAAAGGTTACTTGTCTATGAATACATGAAGAACAGAAGTTTGGACCTCTTCATACATGGAAACAGTGATCAATTTCTGAATTGGAGCACTAGGTTCCAAATTATTCTGGGAGTAGCGCGAGGACTACAATACCTTCATGAGGATTCACACCAAAGAATTGTTCATCGAgacatcaaagccagcaacattcttcttgatgataagtttcacccaaggattggagactttgggctagcaagattTTTCCCTGAAGACCAAGCTTATCTTAGCACGCAGTTCGCTGGAACTTTaggttatacagctcctgaatatgctattagaggagaattgtcagaaaaggcagatatctatagttttggagttcttgtgcttgaaataatttgttgcaggaaaaacaCAGAGCATACTTTGCCATCAGAAATGCAGTACCTCCCAGAATATGCATGGAAACTGTACGAGAATGCAAGGATATTGGACATTGTAGATCCAAAGCTGCGAGAACATGGATTCGTAGAAAAGGATGTTATGCAAGCAAACCATGTTGCTTTCTTATGTCTTCAGCCTCATGCACATTTGAGACCTCCCATGTCAGAGATCGTGGCATTGTTGACATTCAAAATTGAAATGGTTACAACACCAATGAGGCCAGCCTTCCTCGATCGAAGGCCGAGAAAGGGTGATGAAAACCACCCTTTGGAGGCATTATCCCAGGGTTTCACATCTCCCATATATCTAAAAGCATCTGATTGA 1461 0.3874 MGVGCPPCWCTDDVVGSGNVEVLVNGSLVGVGGIDGLVVAQIESQSLLSSPRMPLRVLQAEATSPSNESHAPQHKSGSSLFYILGGLVVLAIVLIFLYVVWKRIKRPAQTMTVASKEHQEFGKHNESAEVMKMIFSSNQQSGSKEFFSGNLRTISCFDYQTLKKATENFHPDNLLGSGGFGPVYQGKLVDGRLVAVKKLALNKSQQGEKEFLVEVRTITSIQHKNLVRLLGCCVDGPQRLLVYEYMKNRSLDLFIHGNSDQFLNWSTRFQIILGVARGLQYLHEDSHQRIVHRDIKASNILLDDKFHPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIICCRKNTEHTLPSEMQYLPEYAWKLYENARILDIVDPKLREHGFVEKDVMQANHVAFLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPRKGDENHPLEALSQGFTSPIYLKASD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01575 486 PANTHER RECEPTOR-LIKE KINASE 148 454 - -
Gma15g01575 486 SUPERFAMILY Protein kinase-like (PK-like) 149 443 IPR011009 -
Gma15g01575 486 SMART serkin_6 169 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01575 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Gma15g01575 486 Gene3D Transferase(Phosphotransferase) domain 1 246 449 - -
Gma15g01575 486 Gene3D Phosphorylase Kinase; domain 1 134 245 - -
Gma15g01575 486 ProSiteProfiles Protein kinase domain profile. 169 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01575 486 Pfam Protein tyrosine and serine/threonine kinase 173 438 IPR001245 GO:0004672|GO:0006468
Gma15g01575 486 CDD STKc_IRAK 175 441 - -
Gma15g01575 486 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 148 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01575 Gma-Chr15 15275586 15280942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01575 157 456 Receptor kinase-like Gene Family AT1G56120 49.000 1.23e-97 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma15g01575 PK_Tyr_Ser-Thr 4.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01575 - - gmx:100799624 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01575 15 15275586 15280942 Gma15g01575 15 15275586 15280942 ECH
Gma15g01575 15 15275586 15280942 Gma09g00567 09 6075748 6081152 GST
Gma17g00529 17 4341851 4345039 Gma15g01575 15 15275586 15280942 PCT
Gma15g01575 15 15275586 15280942 Gma17g00529 17 4341851 4345039 PCT