Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01567 ATGGCATTGGATATGATAGATGTTGTTCCGAGAACGAGGATGGAGGAAGCTGCTTCCGCTGGATTAAAGAGCATGGAGCATCTCATTCGACTCCTTTCTCCAACCTCTTCTAATTCCAATTCTTCTTCTTCTCCTCTTCTCAATACCAATCCCAACAACCTCCACTGCTCCCAAATCACCGACTTCACCGTCTCCAACTTCAAACAAGTCATCAACCTTCTCAACCGCACCGGCCACGCCCGCTTCCGCCGCTCTCCACcccaagcccaagcccaagcccaaacccaaacccaaacccaaacAAGTCTTCAGCCTCAACCAGAAACCCAACAAGGGTTCAGTTTAGATTTCGTGAAGCCCACCATTCTAAACTCAAAACCCAGCAACAAAGACGAGACTTTGACCCTCTCCACCACCTCCTCCTCCTCCTTCACGTCCTCCGTCACCAACGACGCCAGCGTCTCCGACGGCAAGATCGGCCCTTTCCTCCCTCCCTCCGCCGCCAAGCCACCTCTCTCCTCCGCCCACCGGAAAAAGTGCCGCGACGCTGCCGCCGCGCTCTCCACCAAACCCTCCTGCCACTGCTCCAAGAAAAGGAAATCACGCGTGAAACGAACGATTCGTGTGCCGGCGGTAAGCTCCAAGATCGCCGATATCCCATCGGACGAGTACTCGTGGAGAAAATACGGTCAAAAACCGATCAAGGGTTCACCTTACCCTCGAGGGTACTACAAGTGCAGCACCGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAGCGAGCGCAAGATAACCCCAAGATGCTAATAGTGACTTACGAGGGTGAGCACCGTCACGTTCTTCCGTTAACTGCCGCTGCCGGCGTTAGTTTCGGCCATTAA 879 0.5176 MALDMIDVVPRTRMEEAASAGLKSMEHLIRLLSPTSSNSNSSSSPLLNTNPNNLHCSQITDFTVSNFKQVINLLNRTGHARFRRSPPQAQAQAQTQTQTQTSLQPQPETQQGFSLDFVKPTILNSKPSNKDETLTLSTTSSSSFTSSVTNDASVSDGKIGPFLPPSAAKPPLSSAHRKKCRDAAAALSTKPSCHCSKKRKSRVKRTIRVPAVSSKIADIPSDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDNPKMLIVTYEGEHRHVLPLTAAAGVSFGH 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01567 292 ProSiteProfiles WRKY domain profile. 215 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01567 292 SMART WRKY_cls 220 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01567 292 Pfam Plant zinc cluster domain 177 218 IPR018872 -
Gma15g01567 292 MobiDBLite consensus disorder prediction 121 177 - -
Gma15g01567 292 Gene3D WRKY domain 206 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01567 292 MobiDBLite consensus disorder prediction 82 109 - -
Gma15g01567 292 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 8 286 IPR044810 GO:0003700
Gma15g01567 292 MobiDBLite consensus disorder prediction 121 154 - -
Gma15g01567 292 Pfam WRKY DNA -binding domain 222 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01567 292 SUPERFAMILY WRKY DNA-binding domain 218 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01567 292 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 8 286 - -
Gma15g01567 292 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01567 Gma-Chr15 15129199 15130879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01567 1 278 WRKY Transcription Factor Family AT2G24570 48.726 2.26e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma15g01567 WRKY 7e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01567 15 15129199 15130879 Gma15g01567 15 15129199 15130879 ECH
Gma15g01567 15 15129199 15130879 Gma09g00559 09 6000550 6002307 GST
Gma17g00539 17 4422176 4424101 Gma15g01567 15 15129199 15130879 PCT
Gma13g00822 13 22527082 22528331 Gma15g01567 15 15129199 15130879 PCT
Gma15g01567 15 15129199 15130879 Gma17g00539 17 4422176 4424101 PCT
Gma15g01567 15 15129199 15130879 Gma13g00822 13 22527082 22528331 PCT