Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01560 ATGGATCTTCTCTCAATATTGGATAACTTGCTTCAAAGTTTCCTATTTTCGTCCTTTTATTCAAAGAGTTCATTTCTTAATAAGCTGATTGCTATCACGTCTTATCAGGTTTTCTTTCAAGATTCCCATGTTCAGAAATCCAATTCAGAAGGCAAAGAAAGCGTTGTGACAAAAAAAGGATACTACTGTGGAACGATGAGTTTCCTGAACGCTTCTTCGCCGCGCTACGCGGCGGAGAGTGACATAGAGGCCGGTACCTCCGCTCGCCGCTCCGCCGACCTCGACGACGGTGATTTCTCCGATCCCTTTGACATTGCCAGGACCAAGAACGCTTCGGTTGAGCGCCTCAGACGCTGGAGGCAAGCTGCGCTTGTGCTTAATGCTTCTCGTCGATTTCGTTATACCTTGGACTTGAAAAAAGAAGAAGAGAAGAAGCAAATATTGAGAAAGATTAGAGCACACGCACAAGCCATTAGAGCAGCTTATCTTTTCAAAGCAGCTGGTGTGGGGCCAGGGAGTGAACCCATTAAACCTCCTCCGATCCCCACTGCTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAATTTCAAGGGAGCATGACACTGCTGCTCTGCAACAATATGGAGGGGTTGTAGGACTATCAAATTTGTTGAAAACCAATTCGGAGAAGGGTATTCATGGTGATGATGCTGACTTACTAAAACGAAGGAATGCATTTGGTTCCAACAATTATCCTCGGAAGAAAGGAAGAAATTTTCTGATGTTTATGTGGGATGCTTGCAAGGACCTGACCTTGGTTATTTTAATGGTAGCTGCAGCGGCTTCATTGGCACTTGGGATAAAATCTGAGGGTATCAAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTCCGAGACCTAAATGAAGAGAAGAGAAATATACACCTGGAGGTTGTTAGAGGTGGTAGAAGGGTTGAGATCTCTATATATGATATTGTTGTTGGGGATGTTATACCCCTTAATATTGGTAACCAGGTCCCTGCTGATGGAATTCTGATCACTGGCCACTCTCTTGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAAATTGTAAGTATTTATTTCTATCTCCTGGGAAATTGGATTTTTTTTCCCCTTTCCTGCTACCTATTTTGTTTTTTGCAGGTCCATAAGGATTCTAAGGATCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGGTCACTGGTGTTGGTATCAATACTGAGTGGGGGCTTCTAATGGCTAGCATCTCAGAAGATACGGGTGAAGAAACACCATTGCAGGTTCGCTTAAATGGTGTAGCTACTTTCATCGGTATTGTAGGACTTACTGTTGCTGTTATTGTCCTAATTGTGCTACTGGCTAGCAGATATTTCTCTGGGCATACTAAAAACCCAGATGGGTCGGTTCAATTTATAGCAGGCAAGACTAAAGTTGGTGATGCTATTGATGGTGCAATAAAGATAATAACTGTTGCGGTCACCATTGTAGTTGTTGCAGTACCAGAGGGGCTCCCATTAGCAGTTACTTTAACGCTGGCCTACTCGATGAGAAAAATGATGGCAGATAAAGCCTTGGTAAGGAGGCTTTCTGCCTGCGAGACCATGGGCTCTGCCACAACCATATGCAGTGATAAGACTGGTACATTGACTATGAATCAGATGACTGTGGTTGAGGCTTACGCGGGGGGTAAGAAAATTGATCCTCCTCACAAGTTGGAGTCCTATCCTATGCTTCGCTCTCTGCTCATTGAAGGTGTTGCACAGAACACTAATGGCAGTGTTTATGCACCTGAGGGTGCCAATGATGTCGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACAATGGGGAATACAGATTGGGATGAATTTTATGGCAGCTCGATCTGAATCATCAATTATTCATGTTTTTCCATTCAATTCAGAGAAAAAAAGAGGCGGAGTTGCAATTCAAACGGCTGACTGTAACATCCATATACACTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGCTGTACAGGCTATGTTGATGTGAATGACCAGCTGGTGGGGATGGATGAGGAAAAGatgacatttttcaaaaaagctattgaagacatggctgcagatagtctacgttgtgttgccattgcatatagatcatatgaaaaggagaaagttccaactaatgaagaactactttctcactggtctttaccagaggatgatcttattttactagccattgttggtcttaaggatccttgtcgacctggtgtcaaacaggctgtggaactttgccaaaaagctggggttaagGTGAAAATGGTCACTGGTGATAATGTGAAAACTGCAAAAGCAATTGCTTTGGAATGTGGAATACTTAATTCATATGCTGATGCTACAGAGCCAAACATCATTGAAGGGAAAACATTTCGTGGCTATTCAGATGCACAGAGAGATGAAATTGCTGACAGGATATCGGTCATGGGACGGTCATCTCCCAATGACAAACTATTGCTAGTACAAGCATTGAGGAGGAAGGGTCATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTTCATGAGGCCGATATAGGTCTAGCAATGGGTATCCAAGGTACAGAAGTTGCCAAAGAGAGCTCCGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTGGCCGCTCTAGTGATAAATGTTGTTGCTGCTATTTCATCTGGTGATGTTCCATTAAATGCAGTGCAGCTTCTTTGGGTAAATCTTATCATGGATACTCTGGGAGCACTAGCCCTGGCAACTGAACCACCAACTGATCACCTCATGGATCGATCCCCAGTGGGTCGAAGAGAACCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATACAGGCAATGTACCAAGTGTCTGTCTTGCTTGTGCTCAATTTCCGAGGCATAAGCATACTGGGTCTGAGCCATGACAGAAAAGCTCATGCAATCAAAGTGAAGAATACTTTGATATTCAATGCATTTGTTCTCTGTCAAATCTTTAATGAATTTAATGCTCGAAAGCCAGATGAATTCAACATATTCAAAGGAGTCACAAGAAACTACCTCTTTATGGGTATCATTGGATTAACGGTTGTGCTTCAGATTGTCATCATTGAATTTCTTGGCAAGTTTACATCAACAGTGAGGCTTAATTGGAAGCATTGGCTCATCTCTGTCGTTATTGGATTGATTGGTTGGCCTCTTGCTGTGATTGGGAAATTGATACCGGTGCCAACAACTCCCATCAACAACGTTTTTTCAAAATTTCGAATTTCTAGAAAGAAGGAACCTGAGGAATCTCAATAG 3522 0.3998 MDLLSILDNLLQSFLFSSFYSKSSFLNKLIAITSYQVFFQDSHVQKSNSEGKESVVTKKGYYCGTMSFLNASSPRYAAESDIEAGTSARRSADLDDGDFSDPFDIARTKNASVERLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGVGPGSEPIKPPPIPTAGEFPIGQEQLASISREHDTAALQQYGGVVGLSNLLKTNSEKGIHGDDADLLKRRNAFGSNNYPRKKGRNFLMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVVRGGRRVEISIYDIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVSIYFYLLGNWIFFPLSCYLFCFLQVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVIVLIVLLASRYFSGHTKNPDGSVQFIAGKTKVGDAIDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKIDPPHKLESYPMLRSLLIEGVAQNTNGSVYAPEGANDVEVSGSPTEKAILQWGIQIGMNFMAARSESSIIHVFPFNSEKKRGGVAIQTADCNIHIHWKGAAEIVLACCTGYVDVNDQLVGMDEEKMTFFKKAIEDMAADSLRCVAIAYRSYEKEKVPTNEELLSHWSLPEDDLILLAIVGLKDPCRPGVKQAVELCQKAGVKVKMVTGDNVKTAKAIALECGILNSYADATEPNIIEGKTFRGYSDAQRDEIADRISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGISILGLSHDRKAHAIKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFKGVTRNYLFMGIIGLTVVLQIVIIEFLGKFTSTVRLNWKHWLISVVIGLIGWPLAVIGKLIPVPTTPINNVFSKFRISRKKEPEESQ 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01560 1173 PANTHER CATION TRANSPORTING ATPASE 92 388 - -
Gma15g01560 1173 SUPERFAMILY Calcium ATPase, transmembrane domain M 211 1149 IPR023298 -
Gma15g01560 1173 Gene3D - 260 1136 - -
Gma15g01560 1173 Pfam Ca2+-ATPase N terminal autoinhibitory domain 101 143 IPR024750 GO:0005516
Gma15g01560 1173 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 584 790 IPR023299 GO:0000166
Gma15g01560 1173 PRINTS P-type cation-transporting ATPase superfamily signature 885 904 - -
Gma15g01560 1173 PRINTS P-type cation-transporting ATPase superfamily signature 376 390 - -
Gma15g01560 1173 PRINTS P-type cation-transporting ATPase superfamily signature 909 921 - -
Gma15g01560 1173 PRINTS P-type cation-transporting ATPase superfamily signature 800 810 - -
Gma15g01560 1173 PRINTS P-type cation-transporting ATPase superfamily signature 578 592 - -
Gma15g01560 1173 PRINTS P-type cation-transporting ATPase superfamily signature 778 789 - -
Gma15g01560 1173 Gene3D - 233 453 - -
Gma15g01560 1173 SUPERFAMILY HAD-like 576 990 IPR036412 -
Gma15g01560 1173 ProSitePatterns E1-E2 ATPases phosphorylation site. 580 586 IPR018303 -
Gma15g01560 1173 PANTHER CALCIUM-TRANSPORTING ATPASE 92 388 - -
Gma15g01560 1173 PANTHER CATION TRANSPORTING ATPASE 412 1163 - -
Gma15g01560 1173 Pfam E1-E2 ATPase 330 556 - -
Gma15g01560 1173 Pfam Cation transporting ATPase, C-terminus 970 1147 IPR006068 -
Gma15g01560 1173 Pfam haloacid dehalogenase-like hydrolase 575 899 - -
Gma15g01560 1173 CDD P-type_ATPase_Ca_PMCA-like 234 1018 - -
Gma15g01560 1173 SFLD p-type atpase 560 937 IPR044492 -
Gma15g01560 1173 SFLD C1.7: P-type atpase like 560 937 - -
Gma15g01560 1173 SMART Cation_ATPase_N_a_2 208 282 IPR004014 -
Gma15g01560 1173 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 852 965 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01560 1173 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 519 601 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01560 1173 Gene3D - 588 785 IPR023299 GO:0000166
Gma15g01560 1173 Gene3D - 111 166 - -
Gma15g01560 1173 SUPERFAMILY Calcium ATPase, transduction domain A 330 450 IPR008250 -
Gma15g01560 1173 PANTHER CALCIUM-TRANSPORTING ATPASE 412 1163 - -
Gma15g01560 1173 Pfam Cation transporter/ATPase, N-terminus 210 277 IPR004014 -
Gma15g01560 1173 Gene3D - 575 930 IPR023214 -
Gma15g01560 1173 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 418 1149 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01560 Gma-Chr15 14996624 15020366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01560 66 1168 Primary Pumps ATPases AT5G57110 72.670 0.0 1603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01560 K01537 - gmx:100792945 2034.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01560 15 14996624 15020366 Gma15g01560 15 14996624 15020366 ECH
Gma15g01560 15 14996624 15020366 Gma09g00553 09 5909228 5925819 GST
Gma17g00545 17 4466032 4488053 Gma15g01560 15 14996624 15020366 PCT
Gma13g00819 13 22488390 22508519 Gma15g01560 15 14996624 15020366 PCT
Gma15g01560 15 14996624 15020366 Gma17g00545 17 4466032 4488053 PCT
Gma15g01560 15 14996624 15020366 Gma13g00819 13 22488390 22508519 PCT