Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gma15g01560 | ATGGATCTTCTCTCAATATTGGATAACTTGCTTCAAAGTTTCCTATTTTCGTCCTTTTATTCAAAGAGTTCATTTCTTAATAAGCTGATTGCTATCACGTCTTATCAGGTTTTCTTTCAAGATTCCCATGTTCAGAAATCCAATTCAGAAGGCAAAGAAAGCGTTGTGACAAAAAAAGGATACTACTGTGGAACGATGAGTTTCCTGAACGCTTCTTCGCCGCGCTACGCGGCGGAGAGTGACATAGAGGCCGGTACCTCCGCTCGCCGCTCCGCCGACCTCGACGACGGTGATTTCTCCGATCCCTTTGACATTGCCAGGACCAAGAACGCTTCGGTTGAGCGCCTCAGACGCTGGAGGCAAGCTGCGCTTGTGCTTAATGCTTCTCGTCGATTTCGTTATACCTTGGACTTGAAAAAAGAAGAAGAGAAGAAGCAAATATTGAGAAAGATTAGAGCACACGCACAAGCCATTAGAGCAGCTTATCTTTTCAAAGCAGCTGGTGTGGGGCCAGGGAGTGAACCCATTAAACCTCCTCCGATCCCCACTGCTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAATTTCAAGGGAGCATGACACTGCTGCTCTGCAACAATATGGAGGGGTTGTAGGACTATCAAATTTGTTGAAAACCAATTCGGAGAAGGGTATTCATGGTGATGATGCTGACTTACTAAAACGAAGGAATGCATTTGGTTCCAACAATTATCCTCGGAAGAAAGGAAGAAATTTTCTGATGTTTATGTGGGATGCTTGCAAGGACCTGACCTTGGTTATTTTAATGGTAGCTGCAGCGGCTTCATTGGCACTTGGGATAAAATCTGAGGGTATCAAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTCCGAGACCTAAATGAAGAGAAGAGAAATATACACCTGGAGGTTGTTAGAGGTGGTAGAAGGGTTGAGATCTCTATATATGATATTGTTGTTGGGGATGTTATACCCCTTAATATTGGTAACCAGGTCCCTGCTGATGGAATTCTGATCACTGGCCACTCTCTTGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAAATTGTAAGTATTTATTTCTATCTCCTGGGAAATTGGATTTTTTTTCCCCTTTCCTGCTACCTATTTTGTTTTTTGCAGGTCCATAAGGATTCTAAGGATCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGGTCACTGGTGTTGGTATCAATACTGAGTGGGGGCTTCTAATGGCTAGCATCTCAGAAGATACGGGTGAAGAAACACCATTGCAGGTTCGCTTAAATGGTGTAGCTACTTTCATCGGTATTGTAGGACTTACTGTTGCTGTTATTGTCCTAATTGTGCTACTGGCTAGCAGATATTTCTCTGGGCATACTAAAAACCCAGATGGGTCGGTTCAATTTATAGCAGGCAAGACTAAAGTTGGTGATGCTATTGATGGTGCAATAAAGATAATAACTGTTGCGGTCACCATTGTAGTTGTTGCAGTACCAGAGGGGCTCCCATTAGCAGTTACTTTAACGCTGGCCTACTCGATGAGAAAAATGATGGCAGATAAAGCCTTGGTAAGGAGGCTTTCTGCCTGCGAGACCATGGGCTCTGCCACAACCATATGCAGTGATAAGACTGGTACATTGACTATGAATCAGATGACTGTGGTTGAGGCTTACGCGGGGGGTAAGAAAATTGATCCTCCTCACAAGTTGGAGTCCTATCCTATGCTTCGCTCTCTGCTCATTGAAGGTGTTGCACAGAACACTAATGGCAGTGTTTATGCACCTGAGGGTGCCAATGATGTCGAGGTTTCTGGATCACCAACAGAAAAGGCAATTTTACAATGGGGAATACAGATTGGGATGAATTTTATGGCAGCTCGATCTGAATCATCAATTATTCATGTTTTTCCATTCAATTCAGAGAAAAAAAGAGGCGGAGTTGCAATTCAAACGGCTGACTGTAACATCCATATACACTGGAAAGGTGCTGCTGAGATAGTCCTAGCCTGCTGTACAGGCTATGTTGATGTGAATGACCAGCTGGTGGGGATGGATGAGGAAAAGatgacatttttcaaaaaagctattgaagacatggctgcagatagtctacgttgtgttgccattgcatatagatcatatgaaaaggagaaagttccaactaatgaagaactactttctcactggtctttaccagaggatgatcttattttactagccattgttggtcttaaggatccttgtcgacctggtgtcaaacaggctgtggaactttgccaaaaagctggggttaagGTGAAAATGGTCACTGGTGATAATGTGAAAACTGCAAAAGCAATTGCTTTGGAATGTGGAATACTTAATTCATATGCTGATGCTACAGAGCCAAACATCATTGAAGGGAAAACATTTCGTGGCTATTCAGATGCACAGAGAGATGAAATTGCTGACAGGATATCGGTCATGGGACGGTCATCTCCCAATGACAAACTATTGCTAGTACAAGCATTGAGGAGGAAGGGTCATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTTCATGAGGCCGATATAGGTCTAGCAATGGGTATCCAAGGTACAGAAGTTGCCAAAGAGAGCTCCGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGGCGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTGGCCGCTCTAGTGATAAATGTTGTTGCTGCTATTTCATCTGGTGATGTTCCATTAAATGCAGTGCAGCTTCTTTGGGTAAATCTTATCATGGATACTCTGGGAGCACTAGCCCTGGCAACTGAACCACCAACTGATCACCTCATGGATCGATCCCCAGTGGGTCGAAGAGAACCTCTCATAACAAATATTATGTGGAGGAATTTGCTGATACAGGCAATGTACCAAGTGTCTGTCTTGCTTGTGCTCAATTTCCGAGGCATAAGCATACTGGGTCTGAGCCATGACAGAAAAGCTCATGCAATCAAAGTGAAGAATACTTTGATATTCAATGCATTTGTTCTCTGTCAAATCTTTAATGAATTTAATGCTCGAAAGCCAGATGAATTCAACATATTCAAAGGAGTCACAAGAAACTACCTCTTTATGGGTATCATTGGATTAACGGTTGTGCTTCAGATTGTCATCATTGAATTTCTTGGCAAGTTTACATCAACAGTGAGGCTTAATTGGAAGCATTGGCTCATCTCTGTCGTTATTGGATTGATTGGTTGGCCTCTTGCTGTGATTGGGAAATTGATACCGGTGCCAACAACTCCCATCAACAACGTTTTTTCAAAATTTCGAATTTCTAGAAAGAAGGAACCTGAGGAATCTCAATAG | 3522 | 0.3998 | MDLLSILDNLLQSFLFSSFYSKSSFLNKLIAITSYQVFFQDSHVQKSNSEGKESVVTKKGYYCGTMSFLNASSPRYAAESDIEAGTSARRSADLDDGDFSDPFDIARTKNASVERLRRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKAAGVGPGSEPIKPPPIPTAGEFPIGQEQLASISREHDTAALQQYGGVVGLSNLLKTNSEKGIHGDDADLLKRRNAFGSNNYPRKKGRNFLMFMWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVVRGGRRVEISIYDIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVSIYFYLLGNWIFFPLSCYLFCFLQVHKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVIVLIVLLASRYFSGHTKNPDGSVQFIAGKTKVGDAIDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKIDPPHKLESYPMLRSLLIEGVAQNTNGSVYAPEGANDVEVSGSPTEKAILQWGIQIGMNFMAARSESSIIHVFPFNSEKKRGGVAIQTADCNIHIHWKGAAEIVLACCTGYVDVNDQLVGMDEEKMTFFKKAIEDMAADSLRCVAIAYRSYEKEKVPTNEELLSHWSLPEDDLILLAIVGLKDPCRPGVKQAVELCQKAGVKVKMVTGDNVKTAKAIALECGILNSYADATEPNIIEGKTFRGYSDAQRDEIADRISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGISILGLSHDRKAHAIKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFKGVTRNYLFMGIIGLTVVLQIVIIEFLGKFTSTVRLNWKHWLISVVIGLIGWPLAVIGKLIPVPTTPINNVFSKFRISRKKEPEESQ | 1173 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gma15g01560 | 1173 | PANTHER | CATION TRANSPORTING ATPASE | 92 | 388 | - | - | |
| Gma15g01560 | 1173 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 211 | 1149 | IPR023298 | - | |
| Gma15g01560 | 1173 | Gene3D | - | 260 | 1136 | - | - | |
| Gma15g01560 | 1173 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 101 | 143 | IPR024750 | GO:0005516 | |
| Gma15g01560 | 1173 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 584 | 790 | IPR023299 | GO:0000166 | |
| Gma15g01560 | 1173 | PRINTS | P-type cation-transporting ATPase superfamily signature | 885 | 904 | - | - | |
| Gma15g01560 | 1173 | PRINTS | P-type cation-transporting ATPase superfamily signature | 376 | 390 | - | - | |
| Gma15g01560 | 1173 | PRINTS | P-type cation-transporting ATPase superfamily signature | 909 | 921 | - | - | |
| Gma15g01560 | 1173 | PRINTS | P-type cation-transporting ATPase superfamily signature | 800 | 810 | - | - | |
| Gma15g01560 | 1173 | PRINTS | P-type cation-transporting ATPase superfamily signature | 578 | 592 | - | - |
Showing 1 to 10 of 32 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gma15g01560 | K01537 | - | gmx:100792945 | 2034.61 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gma15g01560 | 15 | 14996624 | 15020366 | Gma15g01560 | 15 | 14996624 | 15020366 | ECH | |
| Gma15g01560 | 15 | 14996624 | 15020366 | Gma09g00553 | 09 | 5909228 | 5925819 | GST | |
| Gma17g00545 | 17 | 4466032 | 4488053 | Gma15g01560 | 15 | 14996624 | 15020366 | PCT | |
| Gma13g00819 | 13 | 22488390 | 22508519 | Gma15g01560 | 15 | 14996624 | 15020366 | PCT | |
| Gma15g01560 | 15 | 14996624 | 15020366 | Gma17g00545 | 17 | 4466032 | 4488053 | PCT | |
| Gma15g01560 | 15 | 14996624 | 15020366 | Gma13g00819 | 13 | 22488390 | 22508519 | PCT |
Showing 1 to 6 of 6 entries