Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01515 ATGGAGGGTCAACCTGCTAAACGCAGACGTGTGTACTCTCTTGAACCCAACAAAGTGGAACAAGCAGCATTTGCCAGAAACTACATGAACTATTTGGTGCCAGCATTGATGAAGATCAAGGAAAGAAGCACTTCATCAGATCAACATAGTGGCTATTGTGATGACAATATTCAGAATGTTGTCAAGTATGAAGTGGACATGGCAATGGTGCACTCAGCCCAAGGTTTTGCATGGAGTAATGCTCTAAGTGTGAAGCTTCAAAGAGATAGAGTCAATGTAGATTGTGACACCACTAGCTTTGGTGAAGGTTCATCATCATCAAGGGTTTGTGGCCAAAATTGTGAAATGGTGCCGTTGGATAATTTCCCTTCAAACCCTAGTTTGAAATCTAATAACAAGTGCAAGGAAATGCCTGAAATGAAAAGGGGTTTGAGAGAAGATGATGATGGTGATGAAGATGAAGTCATCAATGGTCAATTGAAGAGCCTAAGAAGGTTGATGCCGGGTGGAGAAGAGATGTGTAGTGAACAAATGGTGACAGAACTACAAAGCTATGTAAGCTGTTTGCAAATGCAGGTGAACATTCTTCGGTGCCTCGCGGAGACACATTGA 612 0.4232 MEGQPAKRRRVYSLEPNKVEQAAFARNYMNYLVPALMKIKERSTSSDQHSGYCDDNIQNVVKYEVDMAMVHSAQGFAWSNALSVKLQRDRVNVDCDTTSFGEGSSSSRVCGQNCEMVPLDNFPSNPSLKSNNKCKEMPEMKRGLREDDDGDEDEVINGQLKSLRRLMPGGEEMCSEQMVTELQSYVSCLQMQVNILRCLAETH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01515 203 PANTHER TRANSCRIPTION FACTOR BHLH146 3 202 - -
Gma15g01515 203 CDD bHLH_AtIBH1_like 156 200 IPR044549 GO:0006355
Gma15g01515 203 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 202 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01515 Gma-Chr15 14144870 14145768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01515 7 86 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 47.500 1.02e-15 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01515 - - gmx:100805301 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01515 15 14144870 14145768 Gma09g00507 09 5223365 5223988 GST
Gma17g00580 17 4804608 4805237 Gma15g01515 15 14144870 14145768 PCT
Gma13g00785 13 22118653 22119276 Gma15g01515 15 14144870 14145768 PCT
Gma15g01515 15 14144870 14145768 Gma17g00580 17 4804608 4805237 PCT
Gma15g01515 15 14144870 14145768 Gma13g00785 13 22118653 22119276 PCT