Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01509 ATGCATTTTCTGACTCTTGCTATGGACAAATTTCTGAGTAATATGGAAAGAGAAAAGCCAATCAGGTTTACTAGTGAGCAGCTCAGGATTGCAACTGATAACTACTCATCATTATTGGGATCAGGAGGTTTTGGAGAAGTTTATAAAGGAAATTTGAGTGATGGAATCACTGTGGCTGTGAAGGTTCTACGTGGTAACTCAGATAAGAGAATTGAGGAACAATTTATGGCAGAAGTGGGTAGGAGAAGAAACGTTGACACTAACCTTCCAGAAAGCCAAGAGTGGTTTCCAGTATGGGTTTGGAAAAGATTTGATACTGGAGAATTGGTAGAGTTAAGAATGGCTTGTGGAATAGAGGAGAGACATCATAAAATGGCTGAAAGAATGGTTAAGGTAGCTTTGCTATGTGTTCAGTATAGACCAGATTCAAGACCAATAATGAGTGATGTAGTGAAAATGTTGGAAGGTTCGGTGGAAATTTCTAAACCCATGAACCCATTTCAGCATATGATGGATGGGACTATCCCTGGTCATTCAGCCCAAGCATCACAAACTGATGCTAATACAAGTGTTAATTCTGGCTCTTCTGCTACGGTAACCCAACCAGGCATTGTATATGATAATCCTATGATGAGGAATGATGACATTGAATGGACCTCTACCATTGCTGATGAATGA 678 0.3982 MHFLTLAMDKFLSNMEREKPIRFTSEQLRIATDNYSSLLGSGGFGEVYKGNLSDGITVAVKVLRGNSDKRIEEQFMAEVGRRRNVDTNLPESQEWFPVWVWKRFDTGELVELRMACGIEERHHKMAERMVKVALLCVQYRPDSRPIMSDVVKMLEGSVEISKPMNPFQHMMDGTIPGHSAQASQTDANTSVNSGSSATVTQPGIVYDNPMMRNDDIEWTSTIADE 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01509 225 Pfam Protein tyrosine and serine/threonine kinase 37 80 IPR001245 GO:0004672|GO:0006468
Gma15g01509 225 Gene3D Phosphorylase Kinase; domain 1 7 87 - -
Gma15g01509 225 SUPERFAMILY Protein kinase-like (PK-like) 14 81 IPR011009 -
Gma15g01509 225 MobiDBLite consensus disorder prediction 174 204 - -
Gma15g01509 225 ProSiteProfiles Protein kinase domain profile. 33 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01509 225 PANTHER RUST RESISTANCE KINASE LR10-RELATED 79 218 IPR045874 GO:0004672
Gma15g01509 225 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 80 IPR045874 GO:0004672
Gma15g01509 225 PANTHER PUTATIVE-RELATED 79 218 - -
Gma15g01509 225 PANTHER PUTATIVE-RELATED 2 80 - -
Gma15g01509 225 ProSitePatterns Protein kinases ATP-binding region signature. 39 61 IPR017441 GO:0005524
Gma15g01509 225 MobiDBLite consensus disorder prediction 177 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01509 Gma-Chr15 14008334 14009458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01509 22 86 Receptor kinase-like Gene Family AT5G38280 39.130 6.84e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma15g01509 PK_Tyr_Ser-Thr 2.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01509 - - gmx:100776445 305.834