Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01508 ATGGATAAATTTCTGAGTAATATGGAAAAAGAAAAGCCAATGAGGTATACTGGTGAGCAGCTCAGGATTGCAACTGATAACTACACTACAGTGTTGGGGTCAGGGTGTTTTGGAGAAGTTTATAAAGGAAATTTTAAGGGACGGAACCATATGGCTGTGAAGGTTCTACGTGGGAATTCAGATAAGAGATTTGAGGAGCAACTTATGGCAGAACTAGgcaggagaagAAACCTTGACATTAACCTTCGAGAAAGCCAAGAATGGTTTTCAGTATGGGTTTGGAAAAAAATTGATGCTGGAGAATTGGGAGAGTTAATAAAGGCTTGTGGTATCAAGAAGAGGCATGAGGAAATGGCTAAAAGAATGGTTAAGGTAGCATTGCTGTGTGTCCAATATATGCCAGTATCAAGACCAATAATGAGTTATGTGGTAAAAATGTTGGAAGGTTCGGCGAAAATTTCTAAACCTTCGAACCCATTTCAGTATGGGACTTTCCCTGCTCATTTAGTCCATGCATCAAGGACCAATGCTAGTACAAGTGTTTGA 546 0.3883 MDKFLSNMEKEKPMRYTGEQLRIATDNYTTVLGSGCFGEVYKGNFKGRNHMAVKVLRGNSDKRFEEQLMAELGRRRNLDINLRESQEWFSVWVWKKIDAGELGELIKACGIKKRHEEMAKRMVKVALLCVQYMPVSRPIMSYVVKMLEGSAKISKPSNPFQYGTFPAHLVHASRTNASTSV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01508 181 Gene3D Phosphorylase Kinase; domain 1 3 79 - -
Gma15g01508 181 PANTHER RUST RESISTANCE KINASE LR10-RELATED 72 166 IPR045874 GO:0004672
Gma15g01508 181 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Gma15g01508 181 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 73 IPR045874 GO:0004672
Gma15g01508 181 PANTHER PUTATIVE-RELATED 1 73 - -
Gma15g01508 181 PANTHER PUTATIVE-RELATED 72 166 - -
Gma15g01508 181 SUPERFAMILY Protein kinase-like (PK-like) 11 133 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01508 Gma-Chr15 13991521 13992513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01508 85 150 Receptor kinase-like Gene Family AT1G66980 40.909 4.02e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma15g01508 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01508 - - gmx:100775360 224.557