Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01506 ATGTCTCCCGTAACTCTCATAATCGTGGGCTTTGCAGGTATCTTCTTTGTGATATTTTGTATTTTGGTATGGCTCCAGCCCAACTGCAAATCAATACCTGCTGGAATACTTACTCCAGACTCAAAGTTTATGTCACTTACTATGGATAAATTTCTGAACGAGATGGAAAGGATGAAGCCTATCCGATTTACAAATCAGCATCTAAGAATTGCAACTGATAACTACACTTACTTGTTGGGGTCAGGAGGTTTTGGAGCAGTCTATAAGGGAGTTTTTAGCGACGGAACAATTGTAGCTGTGAAGGTTCTACatgggaattctgacaagataattgaggagcagtttatggcagaagtggggacagttggcaatgttcaccatttcaatctggttcggctctatggattttgctttggcagaaacatgagagctctggtttatgagtacatggggaatggctctcttgacaagtatctgtttgatgaaaataggaccatagaatttgaaaagcttcatgagattgcaattgggacagccaaaggccttgcttacttgcatgaagaatgtcaacaaagaataatccactatgacatcaaaccaggaaatattctcttggacaggaacctcaatcctaaagtagctgattttggtttagccaaagtttgcaacaggaaaaatactcatataaccctgactaggggtaggggaactcctggttatgctgcccctgagctttggatgccaaattttcctataactcataaatgtgatgtctatagctttggcatgctattatttgaaatCCTAGGCAGGAGAAGAAACCTTGACATAGACCATGCTGAAAGCCAGGAATGGTTTCCTATATGGGTTTGGAAAAGATTTGAGGCTGAAGAAGCAAAGGAATTAATTGTAGCGTGTGGGATAGAGGATCAAAACAGAGAGATTGCTGAAAGAATGGTTAAGGTTGCTCTATTATGTGTTCTGTATAGGCAAGAATCAAGACCTATAATGAGTGTTGTGGTGAAAATGTTGGAGGGTTCAATTGAAATTCCAAAACCTCTAAACCCATTTCAGCACATGATTGATGGGACTGTTCCACTCCCAGCATCACAGACCAACACTGATACAAGTGCTGGTTCAGTTTCTTCTGTGATGGTAACTGAATCCAGCCTTCAATCTGCTCCTCCTATTGTGACGAAGCTCGAGATTGAATCAGCTTCTACCTAA 1227 0.2469 MSPVTLIIVGFAGIFFVIFCILVWLQPNCKSIPAGILTPDSKFMSLTMDKFLNEMERMKPIRFTNQHLRIATDNYTYLLGSGGFGAVYKGVFSDGTIVAVKVLHGNSDKIIEEQFMAEVGTVGNVHHFNLVRLYGFCFGRNMRALVYEYMGNGSLDKYLFDENRTIEFEKLHEIAIGTAKGLAYLHEECQQRIIHYDIKPGNILLDRNLNPKVADFGLAKVCNRKNTHITLTRGRGTPGYAAPELWMPNFPITHKCDVYSFGMLLFEILGRRRNLDIDHAESQEWFPIWVWKRFEAEEAKELIVACGIEDQNREIAERMVKVALLCVLYRQESRPIMSVVVKMLEGSIEIPKPLNPFQHMIDGTVPLPASQTNTDTSAGSVSSVMVTESSLQSAPPIVTKLEIESAST 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01506 408 Gene3D Phosphorylase Kinase; domain 1 47 149 - -
Gma15g01506 408 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Gma15g01506 408 Pfam Protein tyrosine and serine/threonine kinase 78 344 IPR001245 GO:0004672|GO:0006468
Gma15g01506 408 SMART serkin_6 73 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01506 408 PANTHER PUTATIVE-RELATED 15 406 - -
Gma15g01506 408 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01506 408 ProSitePatterns Protein kinases ATP-binding region signature. 79 101 IPR017441 GO:0005524
Gma15g01506 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Gma15g01506 408 SUPERFAMILY Protein kinase-like (PK-like) 54 345 IPR011009 -
Gma15g01506 408 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 406 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01506 Gma-Chr15 13979285 13980846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01506 62 366 Receptor kinase-like Gene Family AT5G38280 42.857 7.25e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Gma15g01506 PK_Tyr_Ser-Thr 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01506 - - gmx:100819737 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01506 15 13979285 13980846 Gma09g00501 09 5116204 5117001 GST