Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01502 ATGGTGGCTAGAATGTCAAAACATGTTGAAGAGGCTTCTAGCAGAAAATCTCAAACACAAAGATTCATTGATAATTTTGCACAAACTGTTGGCTTGATTTCAGCTGGCATTGCTGTGGTACCGGCTGCATTAAAAGTTCATGATATTAAGCCTTGGTTTCATCTGGTAATTGTGGTTTTATTAATTGCATGCCCTTGTGCTCTCATCCTCTCCACGCCTATTGCAATCTTTTGTGCTCTCACAAAAGCTGCAATAAGTGGATTACTACTAAAAGGTGGAGATTATATAGAAACACTTTCTGGAATTAAGACTGTGGCTTTTGATAAAACAGGTACAATAACACGAGGAGAGTTCACTGTGACAGATTTTTCAGTTGTAGATGACATTAGCATTAAAACTTTATTGTACTGGGTTTCAAGTATTCAGAGTAAATCAAGTCATCCTATGGCAGCTGCATTAGTGGAATATGGAATGTCGAATTCTATCAAGCCAATCCCTAAAAATGTGGAGAATTTTGAAAATCTTCCTGGGGAAGGAGTTTTGGGTACAATTGATGGGAAGGATATCTGTATAGGAAATAGAAGAATTGGTGCTTTGGAGGCAATAGAAGAGCTAAAGTTGTTAGGCGTGAGGTCAGTCATGCTAACAGGAGATAGGTCTCAGGATGCTATAGCTTCACCTTCAGAAAAGGCAGTGATCATTGAGAATTTCAAGAAAGATGGGCTAATAGCCATGATTGGAGATGGCATAAATGATGCTCCTGCCTTAGTAAAAAAGGCATTGAGTTTGAGTGGTGAAGTTACTAAGATTAACGTTACTCAGCTTCCCAAAACAAATAAACTGTAA 846 0.383 MVARMSKHVEEASSRKSQTQRFIDNFAQTVGLISAGIAVVPAALKVHDIKPWFHLVIVVLLIACPCALILSTPIAIFCALTKAAISGLLLKGGDYIETLSGIKTVAFDKTGTITRGEFTVTDFSVVDDISIKTLLYWVSSIQSKSSHPMAAALVEYGMSNSIKPIPKNVENFENLPGEGVLGTIDGKDICIGNRRIGALEAIEELKLLGVRSVMLTGDRSQDAIASPSEKAVIIENFKKDGLIAMIGDGINDAPALVKKALSLSGEVTKINVTQLPKTNKL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01502 281 PANTHER HEAVY METAL ATPASE TRANSPORTER 197 265 - -
Gma15g01502 281 PANTHER HEAVY METAL ATPASE TRANSPORTER 1 198 - -
Gma15g01502 281 Gene3D - 117 195 IPR023299 GO:0000166
Gma15g01502 281 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 197 265 - -
Gma15g01502 281 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 1 198 - -
Gma15g01502 281 Pfam E1-E2 ATPase 2 84 - -
Gma15g01502 281 Pfam haloacid dehalogenase-like hydrolase 102 195 - -
Gma15g01502 281 Gene3D - 97 116 IPR023214 -
Gma15g01502 281 Gene3D - 197 258 IPR023214 -
Gma15g01502 281 SUPERFAMILY HAD-like 94 257 IPR036412 -
Gma15g01502 281 ProSitePatterns E1-E2 ATPases phosphorylation site. 108 114 IPR018303 -
Gma15g01502 281 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 8 127 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01502 281 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 101 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01502 Gma-Chr15 13935662 13937588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01502 1 264 Primary Pumps ATPases AT2G19110 46.951 1.10e-92 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01502 K01534 - gmx:100815324 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01502 15 13935662 13937588 Gma09g00497 09 5055661 5062815 GST