Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01501 ATGAAGTATATTAGGAGCAACAGCTTGAAGAGGCTCTTTTCGTTTGGGAGACACGGGTTTGGGGAAGAAAACGACGTGGGGTTGGTGGTTTTTCCTTGTGAAGAGCACCCTCCAAGACCCTCTTGGAAATGCTTCTCTTATGAAGAGTTGTTTGATGCCACCAATGGCTTTAGCTCAGAGAATGTGATTGGTAAAGGAGGGTATGCGGAGGTTTATAAGGGAATATTGAATGGTGGTGAGGAAGTTGCGGTGAAGAGGCTCACAAGAACTTCAAGGGATGAGAGAAAGGAGAAGGAGTTTCTGTTAGAGATTGGCACAATTGGTCACGTGCGTCATTCCAACGTGTTGCCTCTTCTGGGGTGTTGCATTGATAATGGACTTTACCTCGTTTTTGAGCTATCCAACGTTGGTTCTGTTGCTTCTCTTATTCATGATGAGCACTTGCCTCATTTGGATTGGAAAACAAGGTATAAGATAGCTCTTGGGACTGCACGTGGCCTTCACTACTTGCACAAAGGCTGCAAGAGGAGGATCATTCATAGGGACATCAAGGCCTCAAACATTTTGTTGACAGCAGATTTTGAACCGAAGATATCTGATTTTGGACTAGCAAGGTGGCTTCCATCTCAGTGGACTCACCATTCAATAGCTCCAATAGAAGGGACATTTGGGCATTTAGCACCTGAGTACTACTTGCATGGAGTTGTGGATGAGAAGACTGATGTATTTGCCTTTGGCGTATTCTTGCTTGAAGTCATCTCTGGGAGGAAACCAGTGGATGGGTCTCACCAAAGCTTGCACAGCTGGGCTAAACCAATACTAAACAAAGGGGAGATAGAAAAGCTGGTAGATCCAAGGCTTGGAGGGGCTTATGATGTGACACAGTTTAATAGAGTAGCCTTTGCTGCCTCCCTGTGCATTCGGGCATCTGCAACTTGCAGACCTACCATGAGTGAGGTATTGGAGGTAATGGAGGAGTGGGAGATGGATAAAGGGAAGTGGGAAATGCCAGAGGAAGAAGAGCAAGAGGAGGAATTATGGGGTTTTGAGGATCTAGAATATGAATATGACAGTTCCTTTTCAATGTCACTACCTGACTCTGTGGGAATTGAGGCATTAGTTGCAATGTCCTCTCTAACTAGCATGACTCCTCAAAAAGCCGTTATTGCTGAAACTGGGGAACGTGTTGATGTCAATGATGTTAAGATCAACACCATACTCGCGGTCAAGGCTGGTGACGCTATTCCTCTTGATGGAATCGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAATCATTACCTGTGATCAAAGAGTTAGATTCAGTATTATGGGCTGGAACTATTAATGTGAATGATTAA 1374 0.4454 MKYIRSNSLKRLFSFGRHGFGEENDVGLVVFPCEEHPPRPSWKCFSYEELFDATNGFSSENVIGKGGYAEVYKGILNGGEEVAVKRLTRTSRDERKEKEFLLEIGTIGHVRHSNVLPLLGCCIDNGLYLVFELSNVGSVASLIHDEHLPHLDWKTRYKIALGTARGLHYLHKGCKRRIIHRDIKASNILLTADFEPKISDFGLARWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHSWAKPILNKGEIEKLVDPRLGGAYDVTQFNRVAFAASLCIRASATCRPTMSEVLEVMEEWEMDKGKWEMPEEEEQEEELWGFEDLEYEYDSSFSMSLPDSVGIEALVAMSSLTSMTPQKAVIAETGERVDVNDVKINTILAVKAGDAIPLDGIVVEGKCEVDEKMLTGESLPVIKELDSVLWAGTINVND 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01501 457 Gene3D Transferase(Phosphotransferase) domain 1 135 349 - -
Gma15g01501 457 Gene3D - 370 457 - -
Gma15g01501 457 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524
Gma15g01501 457 SUPERFAMILY Protein kinase-like (PK-like) 37 327 IPR011009 -
Gma15g01501 457 PANTHER OS08G0249100 PROTEIN 32 352 - -
Gma15g01501 457 Gene3D Phosphorylase Kinase; domain 1 33 133 - -
Gma15g01501 457 SUPERFAMILY Calcium ATPase, transduction domain A 394 456 IPR008250 -
Gma15g01501 457 Pfam E1-E2 ATPase 386 456 - -
Gma15g01501 457 SMART serkin_6 57 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01501 457 PANTHER OS04G0654600 PROTEIN 32 352 - -
Gma15g01501 457 Pfam Protein tyrosine and serine/threonine kinase 60 265 IPR001245 GO:0004672|GO:0006468
Gma15g01501 457 ProSiteProfiles Protein kinase domain profile. 57 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01501 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01501 Gma-Chr15 13929312 13935540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01501 41 360 Trihelix Transcription Factor Family AT5G38560 39.589 2.29e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma15g01501 PK_Tyr_Ser-Thr 5.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01501 - - gmx:100801765 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01501 15 13929312 13935540 Gma09g00496 09 5045570 5050938 GST
Gma17g00586 17 4871804 4877237 Gma15g01501 15 13929312 13935540 PCT
Gma13g00779 13 22036746 22041390 Gma15g01501 15 13929312 13935540 PCT
Gma15g01501 15 13929312 13935540 Gma17g00586 17 4871804 4877237 PCT
Gma15g01501 15 13929312 13935540 Gma13g00779 13 22036746 22041390 PCT