Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01489 ATGGAGGAGGCACATAAGGGGGAGCAAGACAAAGAGAAAGGAGGGGAAGAAGTGAAGTACCGTGGCGTGAGAAGGAGGCCATGGGGTAAGTTCGGAGCAGAGATCAGAGACCCAACAAAATCTACAGGAAGACAATGGTTAGGGACATTTGACACGGCGGAAGAAGCAGCTAGAGCTTATGATCGTGCAGCCATTGAATTGAGGGGTGCTCTTGCAATCCTTAATTTTCCTGATGAGTACTATGCTCATCTCCCTTTTGTATCATCAAACCCTTCTATTTCAAGTAATGGAAGTTCCTATGCTGCACAACAGAAGGAGGTTATTGAGTTTGAGTGTTTGGATAACAAGGTGTTGGAAGACCTTCTTGAGTCCGAAGTGAAAAGAAGGAACGAGGACTAA 399 0.4561 MEEAHKGEQDKEKGGEEVKYRGVRRRPWGKFGAEIRDPTKSTGRQWLGTFDTAEEAARAYDRAAIELRGALAILNFPDEYYAHLPFVSSNPSISSNGSSYAAQQKEVIEFECLDNKVLEDLLESEVKRRNED 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01489 132 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Gma15g01489 132 PANTHER DNA-BINDING DOMAIN 1 126 IPR044808 GO:0003700|GO:0009873
Gma15g01489 132 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Gma15g01489 132 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Gma15g01489 132 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Gma15g01489 132 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Gma15g01489 132 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Gma15g01489 132 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Gma15g01489 132 PANTHER ETHYLENE RESPONSE FACTOR 1 126 - -
Gma15g01489 132 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01489 Gma-Chr15 13589963 13590361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01489 1 129 AP2-EREBP Transcription Factor Family AT3G23230 52.518 2.58e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma15g01489 AP2 9.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01489 - - gmx:100796977 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01489 15 13589963 13590361 Gma09g00480 09 4740070 4740663 GST