Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01483 ATGGTCTTCTCAACTGTCTTTCTCGATGAAGATGACCCCTTTTTTTCTAGAAAAAGGCCAAGAGTGTCAGATCTTGGACATCAAGATGATTTACTTGCTGATGCAGGAATTTCCAGTGATATTTCCTTGTTCTCGCATCAAGATATAGAAAGGGGTACTGGTGATTTTCCCTCTTCCAGCAATACTGATGATAAAGTTGATCCAGATTCTGGAATGGAGATGAGCTGCCCATCAAATGTTAATAGTGGCTATGTTCCTGTGTGTTCTACCACAGGGCATATTTTGCACATGGACCAGAGTTTCTGTGGCTATGTGCAACAACCTGCTTTTGTGAGTGGATGGATGTATGTGAATGAAAATGGGCAAATGTGTGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTTCTGGTTTCTTGCCATCTGAACTTCCTGTGTATCCAGTGATTAATGGCACAATAATGAACCCTGTACCACTGAATTACTTCAAGCAGTTCCCTGATCATGTTTCCACTGGGTTTGCATATCTGAGCTTGGGTATCTCAGGCACAAGGGTGCCTACATTGGCAGTATATGAGCAAGATAGGTTTTTTGAGCATGCTGCTCCTCTGGCTGTTAATCCTGATTCACAGCCAGTTTCAAAGTCGCACATCAATTACTGCATTAAGGAATCCAATCGCTTAAATTCAAACTCAGAGGCATTCAAAAGTTTAATATCTTGTCAGATGTTAGGTGTAGAATGCTGTTGGCTTTATGAGGATGAGAAGGGTATGAAACATGGGCCACATTCTATTAAGGAATTGATATCCTGGCATCGTCATGGATATCTTAAAGATTCAACAGTGATCTCTCATTCTGACAATAAGTATGACACCTTTGTGCTATTGTCTGCTGTAAATACATTAAAAGGAGATATCTCTGGAACCATTTGTAGATCAGTTTCCACAAGTAGCGAGGTTGGTGAAATGGTAAACTTAATTGGTGAAATATCTGAGGACATTTCTTCCCAATTGCACATGGGTATCATGAAAGCTGCTCGCAGAGTTGTGCTAGATGGAATTATTGGTGATATCATTGCAGAATTTGTTACAGAAAAGAAACTTAAGAGGCATAAGCTTGAATCAGCTGACTGTACTCCTGAAAACAATATGATTAGTAAAGGTTCTGCTATTTCCAGTGATCCTGCATCTTCCCACACTTTGGACGATCAGACTTGTCATGAAAGTTCCAGATTGCCCCCAGCCATTATTAAATCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATTTGCTGTGGTTCGCAAGGTACTTCTTGATTATTCCATGCAAGTCATGTGGAATGCAGTGTTTTTTGACACACTAGCAGAATACTTATCTTCCTGGAGGAAAAAGATGCTTTGGTCTCATCCTAAGCCTCAACCATCTGCTAATGGATGTGAAGATCATACTGAAAAGATTGAATCAGAAGCTTTGGTTTTCAATCCAGATTCTTCTGAAAGCAATGTTGATGGCGATAATCAGTTTGGAGTACTGACAACCGAAAAAAATTGTCCCCTGTTATTTTCATCTCCCAGTAGCCTCAAAGGTGGAAATTTACTAGAAGGTCAAAAAGTTTCATGCCCTTATGTTAACTCTAGAGATTTGACTTGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCAAAGGTGTCTTTAGCTGATTACATTCGAAGTTTTGTTGAAAAGGAAGTGAACAAATTAATTCCTTTCCCAGAAGAAAACAAATTTAATGAGGTTGCTGTCGGTGGCACTCATTTTTCAGGGATACTTGCGGATAAAACGTCTATGAAGGAAATTCTAAATGACAAGTCAGTGGATCCTGTAAAGGCTGGAAATTCTTTTGGCGAGTCTGCATCTGGAAACCATAAGTCTGACATATTTTCGAAAGCATTTAAGGAGTTGTGTGGATATGTAGATGATGTGGTTGAAGAGGAGATTGATGACCTACCACCCGGGCTTGAGAAATCTCAAACAGTTGTCCCTCACTATAATTCGAAATTTCGACCTTCAAGGTCGGCTGAAAGTAATCCTAAGATAACAGAATATGTTGCTACAGCACTGTGCCGACAGAAACTGCATGATGAAGTTCTGGAAAAGTGGAGGTTGTTGTTTCTTAATTCTGTGCCCAAGCAAGTTTTTATATCATCAAGTACTGTAAAGAAACATTTTAAGTCTGATGGTCATAAGAAAAGAAAAATGGCCGATGCAAGCAAGGAACATTTGAATAGTGCTACCTCTGGACTGGGAAGAGTGAAGGAAGGAGCAAAGAGTTCTTCTGAAGTTCCGCCGGTGATTGGAAAGTATACCTATTGCCGCAAGAAGCTCTCGCAGAAGGAGTTAATTTTCTCAAAATCTGTAGCAGAAAATGATTCTAGGACAGGGAAGCAGCTTGTGACCAAGTTAAGGAAACATGTTTCTGGAGATGTTGGTGAGGCTGCAGAGGTTAAAATAGCTTCTGCTAAACATGGAAAGACAAAGATGATTAAAGGGAAGAAGGATACATCTTCTAAGGGCAAATCTTCTGTCAGTGTCAATAGTAGCTCACACAATGATCAATTATCTTTAAAGAATAAAGCTGGTCGAAAAGTGTTGAAGTTTTCAGATGATGTTAAGGATTTTGTAAAATCCAATGTAAAGAAGCTTTCAGTGTCAACTAATAATAGTGTTGGCATGAAGAAGGTTGCCAAAAGTGATGGCTGTGATCGTGATGACACTGTTAAAGAGAAGACCACAAGTCATTGCTCCAGAGAGATACAAAATGCAACAAAGAAAGTAACAAAATCAAAAAGGAAACATCAAATGGATGGTACATCTTCACATCCTACAAAGGTTTTGAAAATTTCAAATGGTGGTGCTTATCTGGGAGCCAGTAAACAAGTTCCTGTGGCAAGTAGGAAGTCTGCTAAATCCAAGCCATTGAATTTATGTCCTAGATCTGATGGCTGTGCCAGGACTTCTATTGATGGTTGGGAATGGCATAAATGGTCTCGAAGTGCCAGTCCTGCATATAAAGCACGTGTTAGGGGTCTTCCATGTGTCCGGAACAAGTGCATAGATTCTGAAAATAATTTATTTCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGGGTGAAATTGCGTAACCTTCTTGCTGCTGCAGAGGGTGCAGATCTTCTGAAAGTGCCTCAACTGAAGGCACGGAAGAAGCATTTGCGTTTTCAAAGGAGCAAGATCCATGACTGGGGTCTTGTTGCCTTGGAGCCAATTGAGGCAGAGGATTTTGTGATTGAATATATTGGAGAACTAATTCGTCCTCGGATATCTGATATACGTGAACGCCAGTATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTTAGACTTGATGATGGTTATGTGGTTGATGCTACCAAGAGAGGTGGGATTGCAAGATTTATTAACCACTCTTGTGAGCCCAACTGCTATACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTCATATATGCGAAACGGCATATAGCTGCTGGTGAAGAAATTACATACAATTATAAGTTCCCCTTGGAGGAGAAAAAGATTCCCTGCATTGATTGGGTTTCTGATGCTGGTTGTTTTTTCCGAGGTCCACTTGTGAAATTGTTGAGTGGGCAGAATTTTTGCCATAGGTTATGGATCAGCATCGTTGATGATATAGTCTGA 3738 0.3999 MVFSTVFLDEDDPFFSRKRPRVSDLGHQDDLLADAGISSDISLFSHQDIERGTGDFPSSSNTDDKVDPDSGMEMSCPSNVNSGYVPVCSTTGHILHMDQSFCGYVQQPAFVSGWMYVNENGQMCGPYIKEQLYEGLTSGFLPSELPVYPVINGTIMNPVPLNYFKQFPDHVSTGFAYLSLGISGTRVPTLAVYEQDRFFEHAAPLAVNPDSQPVSKSHINYCIKESNRLNSNSEAFKSLISCQMLGVECCWLYEDEKGMKHGPHSIKELISWHRHGYLKDSTVISHSDNKYDTFVLLSAVNTLKGDISGTICRSVSTSSEVGEMVNLIGEISEDISSQLHMGIMKAARRVVLDGIIGDIIAEFVTEKKLKRHKLESADCTPENNMISKGSAISSDPASSHTLDDQTCHESSRLPPAIIKSVGSIENFWWSFAVVRKVLLDYSMQVMWNAVFFDTLAEYLSSWRKKMLWSHPKPQPSANGCEDHTEKIESEALVFNPDSSESNVDGDNQFGVLTTEKNCPLLFSSPSSLKGGNLLEGQKVSCPYVNSRDLTCILESVENELHFSSKVSLADYIRSFVEKEVNKLIPFPEENKFNEVAVGGTHFSGILADKTSMKEILNDKSVDPVKAGNSFGESASGNHKSDIFSKAFKELCGYVDDVVEEEIDDLPPGLEKSQTVVPHYNSKFRPSRSAESNPKITEYVATALCRQKLHDEVLEKWRLLFLNSVPKQVFISSSTVKKHFKSDGHKKRKMADASKEHLNSATSGLGRVKEGAKSSSEVPPVIGKYTYCRKKLSQKELIFSKSVAENDSRTGKQLVTKLRKHVSGDVGEAAEVKIASAKHGKTKMIKGKKDTSSKGKSSVSVNSSSHNDQLSLKNKAGRKVLKFSDDVKDFVKSNVKKLSVSTNNSVGMKKVAKSDGCDRDDTVKEKTTSHCSREIQNATKKVTKSKRKHQMDGTSSHPTKVLKISNGGAYLGASKQVPVASRKSAKSKPLNLCPRSDGCARTSIDGWEWHKWSRSASPAYKARVRGLPCVRNKCIDSENNLFQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKHLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEITYNYKFPLEEKKIPCIDWVSDAGCFFRGPLVKLLSGQNFCHRLWISIVDDIV 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01483 1245 MobiDBLite consensus disorder prediction 741 775 - -
Gma15g01483 1245 SUPERFAMILY SET domain 1076 1205 IPR046341 -
Gma15g01483 1245 MobiDBLite consensus disorder prediction 50 65 - -
Gma15g01483 1245 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 55 1208 - -
Gma15g01483 1245 Gene3D - 241 324 IPR035445 -
Gma15g01483 1245 Gene3D - 104 174 IPR035445 -
Gma15g01483 1245 MobiDBLite consensus disorder prediction 937 960 - -
Gma15g01483 1245 MobiDBLite consensus disorder prediction 50 73 - -
Gma15g01483 1245 CDD SET_SETD1 1069 1208 - -
Gma15g01483 1245 MobiDBLite consensus disorder prediction 836 872 - -
Gma15g01483 1245 MobiDBLite consensus disorder prediction 853 870 - -
Gma15g01483 1245 SUPERFAMILY GYF domain 246 301 IPR035445 -
Gma15g01483 1245 ProSiteProfiles SET domain profile. 1081 1198 IPR001214 GO:0005515
Gma15g01483 1245 SMART set_7 1081 1204 IPR001214 GO:0005515
Gma15g01483 1245 MobiDBLite consensus disorder prediction 380 408 - -
Gma15g01483 1245 Gene3D SET domain 1030 1208 IPR046341 -
Gma15g01483 1245 Pfam SET domain 1093 1197 IPR001214 GO:0005515
Gma15g01483 1245 ProSiteProfiles GYF domain profile. 248 304 IPR003169 GO:0005515
Gma15g01483 1245 MobiDBLite consensus disorder prediction 380 404 - -
Gma15g01483 1245 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 55 1208 IPR044570 GO:0042800|GO:0051568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01483 Gma-Chr15 13466198 13479632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01483 1072 1208 C2H2 Transcription Factor Family AT2G23740 37.736 2.15e-15 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma15g01483 SET 1.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01483 - - gmx:100806034 2383.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01483 15 13466198 13479632 Gma09g00472 09 4626502 4643824 GST