Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01481 ATGGCGCCGGGAATCGGAGGCCTGCAGCTGACTTCCCTCGCCGGCGACCGGAGAACCGCCGCCGCCGACTCCGATGAGCTGGAGGACATGCGGCTCTTGGACTCCTACGACGAAATCAACGGCGGAGCGAGGCGGATTCAGGTGGAGGTTACCGGAATGACCTGCGCTGCCTGCTCTAATTCCGTCGAATCAGCTCTCAAATCACTCGACGGCGTCATCAGCGCCTCCGTCGCGCTGCTTCAGAACAAAGCCGACGTCGTTTTCAACACGGCTCTGCTCAAGGATGAAGACATAAAAAATGCAATTGAAGATGCTGGGTTTGAAGCAGACATATTACCTGAATCCAGTACAGTTGGAAAGGTGCCACAGGGAACCCTGGTGGGACAGTTCACAATTGGAGGTATGACATGTGCAGCATGTGTAAATTCTGTTGAAGGTATTTTAAGAAATCTTCCAGGGGTCAGAAGGGCTGTGGTAGCTTTGGCTACTTCGTCAGGTGAAGTTGAATATGATCCCAGTGTAATTAGTAAAGATGATATAGTCAACGCAATTGAAGATTCTGGTTTTGATGGTTCATTTATACAAAGCAATGAGCAGGATAAAATAATTTTAAGGGTGGTTGGTGTGTACAGTCTGATTGACGCACAAGTTTTAGAAGGCATTCTTAGCAGCACAAAAGGAGTAAGACAGTTTCATTTTGATCAGGTTTCAGGTGAATTGGATGTTCTGTTTGATCCTGAAGTTCTCAGTTCTAGATCCGTTGTTGATGCAATCCAGGAGGGAAGCAATGGAAAATTTAAATTACATGTCAGAAGCCCTTATACAAGAATGGCTTCTAAAGACGTTGCAGAGACCTCAACCATATTTCGGCTATTCATCTCCAGTCTGTTTCTTAGTATTCCTCTCTTCTTCATGAGGGTAGTTTGTCCTCATATTCCACTATTCTATTCCTTGTTACTTTGGCGATGTGGGCCTTTCCTCATGGGTGATTGGTTGAAATGGGCATTGGTGAGTGTCATCCAATTTGTGATTGGTAAGCGCTTCTACATTGCAGCCAGCAGAGCTCTTAGAAATGGTTCTACGAACATGGATGTCCTGGTTGCTGTGGGAACTACTGCTTCTTATGTTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCTCCAACTTACTTTGAAACAAGTGCTATGCTCATAACATTTGTATTGTTGGGCAAGTATTTGGAATGCCTTGCCAAGGGAAAGACATCTGATGCTATCAAGAAATTAGTAGAACTTACTCCTGCAACAGCTTTACTAGTTGTCAAAGATAAAGGCGGTAAATCTATTGAAGTAAGGGAAATTGATTCTTTGCTTATTCAACCTGGGGACACATTGAAAGTTCTTCCTGGTGCAAAGATTCCTGCTGATGGTATTGTTACTTGGGGCTCAAGTTATGTGAATGAGAGCATGGTAACTGGTGAATCCGTACCTATTATGAAGGAGGTGAATGCTTCCGTTATTGGAGGCACAATAAATTTGCATGGCGTCCTTCACATTCAAGCCACCAAAGTAGGATCTGATACAGTATTGAGTCAGATTATTAGTTTGGTTGAGACGGCCCAGATGTCCAAAGCTCCCATCCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTTCGGTTGTTTCTTTAGCATTATTGACATTATTGGGTTGGTATGTTGCTGGGTCTATTGGAGCTTACCCAGAAGAATGGCTGCCAGAAAATGGAAATCACTTTGTTTTTGCCCTAATGTTCTCAATATCTGTAGTAGTGATTGCATGTCCCTGTGCACTTGGCTTGGCAACACCAACTGCTGTCATGGTGGCAACAGGGGTTGGGGCTAACAATGGAGTGTTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGAGGGTGAAGTATGTGATATTTGATAAAACAGGCACTCTAACTCAGGGAAAAGCCACTGTTACTGCAGCCAAGACATTCACAGGAATGGAACGTGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTAGCAAAAGCAATTTTAGCATATGCACGCCATTTTCATTTCTTTGATGACTCTTCTGATACTACTGGTACCGAGATTGATGCTGAAAATGATGCAAAGTCTGGGTGGCTTTTTGATGTCTCAGACTTCTCTGCTCTTCCTGGAATAGGTGTTCAATGTTTTATAGACGGGAAGCTTATTTTGGTTGGTAACAGGAAGTTGATGGAGGAAAATGGCATAGATATTTCAACAGAAGTGGAAAATTTTGTGGTAGAGCTGGAAGAAAGTGCGAAGACAGGGATACTGGTTGCATATAATGATATATTAACTGGAGTCTTGGGGATTGCAGACCCACTAAAGAGAGAGGCTTCTGTAGTCATAGAGGGCCTCCAGAAAATGGGTGTCACACCTGTTATGGTTACAGGAGATAACTGGAGAACAGCTCGTGCTGTTGCCAAGGAGGTTGGCATCCAAGATGTTAGGGCAGAGGTCATGCCAGCGGGAAAAGCTGACGTTGTTCGTTCATTCCAAAAAGATGGGAGCATAGTTGCAATGGTGGGTGATGGTATCAATGATTCTCCTGCATTAGCTGCTGCTGATGTTGGTATGGCAATTGGGGCTGGGACTGACATAGCAATAGAAGCTGCTGAGTATGTGCTCATGAGAAATAACTTGGAAGATGTGATCACAGCCATCGATCTTTCCCGGAAGACCTTTTCTCGTATTCGATTGAACTATGTGTTTGCCATGGCTTACAATGTTGTGGCTATACCAGTTGCTGCTGGTGTGTTTTATCCTTCACTGGGGATCAAGCTGCCGCCATGGGTTGCTGGTGCATGCATGGCTCTCTCTTCTGTAAGTGTTGTATGCTCTTCTTTGCTTCTTAAAAGATATAAAAGACCCAGACTTACTACAATACTTGAAATAATTGTAGAATAA 2991 0.4397 MAPGIGGLQLTSLAGDRRTAAADSDELEDMRLLDSYDEINGGARRIQVEVTGMTCAACSNSVESALKSLDGVISASVALLQNKADVVFNTALLKDEDIKNAIEDAGFEADILPESSTVGKVPQGTLVGQFTIGGMTCAACVNSVEGILRNLPGVRRAVVALATSSGEVEYDPSVISKDDIVNAIEDSGFDGSFIQSNEQDKIILRVVGVYSLIDAQVLEGILSSTKGVRQFHFDQVSGELDVLFDPEVLSSRSVVDAIQEGSNGKFKLHVRSPYTRMASKDVAETSTIFRLFISSLFLSIPLFFMRVVCPHIPLFYSLLLWRCGPFLMGDWLKWALVSVIQFVIGKRFYIAASRALRNGSTNMDVLVAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKGGKSIEVREIDSLLIQPGDTLKVLPGAKIPADGIVTWGSSYVNESMVTGESVPIMKEVNASVIGGTINLHGVLHIQATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPSVVSLALLTLLGWYVAGSIGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQRVKYVIFDKTGTLTQGKATVTAAKTFTGMERGEFLKLVASAEASSEHPLAKAILAYARHFHFFDDSSDTTGTEIDAENDAKSGWLFDVSDFSALPGIGVQCFIDGKLILVGNRKLMEENGIDISTEVENFVVELEESAKTGILVAYNDILTGVLGIADPLKREASVVIEGLQKMGVTPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAAEYVLMRNNLEDVITAIDLSRKTFSRIRLNYVFAMAYNVVAIPVAAGVFYPSLGIKLPPWVAGACMALSSVSVVCSSLLLKRYKRPRLTTILEIIVE 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01481 996 ProSiteProfiles Heavy-metal-associated domain profile. 127 193 IPR006121 GO:0046872
Gma15g01481 996 Pfam E1-E2 ATPase 430 628 - -
Gma15g01481 996 SFLD Haloacid Dehalogenase 631 922 - -
Gma15g01481 996 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 751 952 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01481 996 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 402 671 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01481 996 ProSiteProfiles Heavy-metal-associated domain profile. 45 111 IPR006121 GO:0046872
Gma15g01481 996 PRINTS P-type cation-transporting ATPase superfamily signature 485 499 - -
Gma15g01481 996 PRINTS P-type cation-transporting ATPase superfamily signature 649 663 - -
Gma15g01481 996 PRINTS P-type cation-transporting ATPase superfamily signature 795 806 - -
Gma15g01481 996 PRINTS P-type cation-transporting ATPase superfamily signature 817 827 - -
Gma15g01481 996 PRINTS P-type cation-transporting ATPase superfamily signature 870 889 - -
Gma15g01481 996 PRINTS P-type cation-transporting ATPase superfamily signature 893 905 - -
Gma15g01481 996 CDD HMA 129 190 IPR006121 GO:0046872
Gma15g01481 996 PANTHER HEAVY METAL P-TYPE ATPASE 18 989 - -
Gma15g01481 996 Gene3D - 128 193 - -
Gma15g01481 996 SUPERFAMILY HAD-like 648 976 IPR036412 -
Gma15g01481 996 Pfam haloacid dehalogenase-like hydrolase 645 884 - -
Gma15g01481 996 TIGRFAM TIGR00003: copper ion binding protein 129 190 IPR006122 GO:0005507
Gma15g01481 996 TIGRFAM TIGR00003: copper ion binding protein 46 109 IPR006122 GO:0005507
Gma15g01481 996 ProSitePatterns Heavy-metal-associated domain. 50 80 IPR017969 GO:0046872
Gma15g01481 996 SUPERFAMILY HMA, heavy metal-associated domain 42 113 IPR036163 GO:0046872
Gma15g01481 996 ProSitePatterns Heavy-metal-associated domain. 132 161 IPR017969 GO:0046872
Gma15g01481 996 SUPERFAMILY Calcium ATPase, transduction domain A 449 535 IPR008250 -
Gma15g01481 996 ProSiteProfiles Heavy-metal-associated domain profile. 201 260 IPR006121 GO:0046872
Gma15g01481 996 SUPERFAMILY Calcium ATPase, transmembrane domain M 384 944 IPR023298 -
Gma15g01481 996 CDD P-type_ATPase_Cu-like 290 966 - -
Gma15g01481 996 Pfam Heavy-metal-associated domain 130 190 IPR006121 GO:0046872
Gma15g01481 996 Pfam Heavy-metal-associated domain 48 108 IPR006121 GO:0046872
Gma15g01481 996 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 363 979 IPR027256 GO:0006812|GO:0016021|GO:0019829
Gma15g01481 996 Gene3D - 660 803 IPR023299 GO:0000166
Gma15g01481 996 Gene3D - 640 920 IPR023214 -
Gma15g01481 996 Gene3D - 417 539 - -
Gma15g01481 996 SUPERFAMILY HMA, heavy metal-associated domain 124 198 IPR036163 GO:0046872
Gma15g01481 996 ProSitePatterns E1-E2 ATPases phosphorylation site. 651 657 IPR018303 -
Gma15g01481 996 SFLD p-type atpase 631 922 IPR044492 -
Gma15g01481 996 CDD HMA 47 109 IPR006121 GO:0046872
Gma15g01481 996 PRINTS H+-transporting ATPase (proton pump) signature 842 858 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01481 996 PRINTS H+-transporting ATPase (proton pump) signature 870 886 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01481 996 PRINTS H+-transporting ATPase (proton pump) signature 901 926 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01481 996 Gene3D - 43 114 - -
Gma15g01481 996 PANTHER ATP7, ISOFORM B 18 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01481 Gma-Chr15 13435174 13442787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01481 1 996 Primary Pumps ATPases AT5G44790 75.272 0.0 1531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01481 K17686 - gmx:100804960 1903.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01481 15 13435174 13442787 Gma09g00471 09 4605660 4612685 GST