Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01453 ATGGCATCGTCCCAGGTTGAAATCGCTTCTTCTTCGCCGTTTGGTTGCGTTTTGAGGGACCGCAATCACCGCGAAGCATGCAGCAGGGAAAGCAGCAACGTGAAGGGCACGCATCATCATGCTACGTTCCAAAGAAACATGAAGAACTTTGTGATGGACCTTAACACGTGCATGGTAGTGTCTTCTGATTCGACAACAAATGAAAATGAAAACAACAGCAGCAGCAGCAACAACAACCAGCGGAAGGCTCCAAAAAACAGCCACCTAGAGAGGCTTCGTATCACACCAGCCAACCCCTTTATTAACAACAACAACATCAACAACAATGAAACCTCGTTGGCCTCGTTGATCAGCCCGAGACACTCGCGGCTTCTCGATCGATGGGCCACGAGACAGGGTTGCCAGATGGTGTCGAATTTGGAGAATGAGGCAGAGTTGTTGTCGATGGACGACAATGACATGCTTCCAAGGACTTCTAGTTCCTCCGAGGAGGAGGACTCATCCTCGGAGACTCAAAACCTGGGTGGTGCCTCTTCTCTTGTTCAGATATGGGAGAAGAGGCTGAACCAATCCGGTGTCTCCAAACCCAATACACCAAGGGAGAGGATTGGTTCGACCTCTTCTTCCATAAATGAGAATGCTAATGCTTTCTCTTCGGAGAATGCTAATGCTCTCACTGGGGAGGAACAATGCTTTGATGGACCCTCAGGGAACGAAGAATCTTTGTTCCCTGATTGGGAATCTAGTGATCATTCCCTTTCGCCAAGTGGCAGGTCGGAGAGGGACAGGGTCAGGGTTGCTGACATCATAAAGAAACTCACTGCTACAAACCCGAATCAGAGTCCAACACCTTCCTTTGCTGATGACAATGAACATGAAGGGTATGGTAGCAGCGTGACAGGTTCTCCTTGTAGGGAGCGTGAATGTGGTAATCAACAACAACAACAACAACATTCGGAGCAGAACCAGAGAGTTAATTGTTCCTTGCGAATTAGAGGGCGCCGGGCATACAATGATTTGCTTGCACAGATGAAGAATGACAGGCATGGGGAGCTTAACAACCTGGTAGAGCGTGGAGCAGTCTCCAAGTTCCCACAAAGAGGTCGCATTCAGGCATTGCTTCGACTTAAATTATTGCAACGTGGCACGGCAGCTAATGATTCGACCCGCCAGAAATCAACAGCATCTGAAGTAAACAACAGACAGCCACAGGGATCTGCAATTATGCAATTAAGGGAAAGGTTTAGCAGTGGGGCTGAACTTAGAACTGCGGTCCAGGCAGAAGTAGCTAATCCAAAAAGTCCTCAAAGGGGGACAGCAAACAAAACCACACAATTGGATAACTCTGCCACCACTGATCATCTGAGCAAAGACACAAGCAACAATAAAGGTCATGGCAATGCCAATCATGCCACAGAATCCACACAAAAGTCGGCGTCACAGACTAGAATAGATCATAACACAGAAGAAGCTCATCCAAGTTCAGATGTCAAGGTCCAAGAAACACGTCCAAGTTCAGATGTCATGACTCCACACAATGACTCACAAGAAACTACCGAGGCAAGTTCATCCACAATTGGTTCAAATCTAAATGAGATAATGGCAGATAGGGCAGAGACGAGCAACCAACAGAATGCTATGGCTAAAAGCAGTAATGATGAGACATTGGATGAGGAAGTGGAAAGTTACCAGAAGTATGCCGAAACCAGTTATGAGGAGAAAGTAGAAGAGGCAAGTAATCACAACTATGGTGATGAGATGGAGGAAGAGGTAGAGGAAATTGAACAGAATTGTTATGAAACTAATTATGACTGGATCAGTGAAATTTCTAGGCCTAGGAGCTATTGGGAAGAGCGCAGGCAAGCATGGTATAGAGAGATGCTTGAAACTGGTTCTCAAAATGAAGATATACGAAGGCTTCTTGAAAGAAGAACAGTGTCAAGTTTCCTTTCTAGTGACTTCAGGGATAGAATGGATAGATTGATGGAATCTCATAGAGGAACACAAACACATCTAGTCAGTAGTCAAGAGCGTGAGGAAGATAGTCATGGATTGATGGCATTTTTACAAGCACGCTTGCATTCTACAATAGCTTCTCAAGATGGAAGAGATGCGAGGGAGGAAGAAGAGGAGGAGAGTAGAAATCAAAATGAGGAAGAGGAAGAAGAAGAGGAGGAGGATAATGCAGATGAGCAGGAGCAGGAGCATGAGGAGGAGAGCTTGATAAGTGGTTTGTATCATGAAGCTGGCGATTATTCTAATGGATCCTCATCATGGAGTTACAGGGACATCGAAGCTGGTTATGATTTCGATAGAGTTGTTTCTACATCCCCACAACCTTATCAATCTCAATCTTTCTATCCAGAAAGTCGGCACTCTCCATCCACCAATCATCATTCAATTGAAATGGAACTCATATATGATTTGAGAGGGCATATGGAGCTACTTTATAATGAGATATCTGAGCTAAGGAAATCAATAAAGGGCTGCATGGAAATGCAGATAGAATTACAACAATCCATGAAACAAGAGGTTCAAACAGTTAAAAAAGAAGAAAAGAAGTCCAATAACAGGACTCCAAAGAAAGGCAACTGCTGCATTTGCTATGAGATGAAAGTTGACTCAGTTTTGTACAGGTGTGGACACATGTGTACATGTCTCAAGTGTGCCAACGAGTTGCAATGGAACAGTGGAAAATGTCCTATATGTCGTGCTAAAATAGAGGATGTTGTTCGCGTATATGTTGACGGTTAG 2754 0.4473 MASSQVEIASSSPFGCVLRDRNHREACSRESSNVKGTHHHATFQRNMKNFVMDLNTCMVVSSDSTTNENENNSSSSNNNQRKAPKNSHLERLRITPANPFINNNNINNNETSLASLISPRHSRLLDRWATRQGCQMVSNLENEAELLSMDDNDMLPRTSSSSEEEDSSSETQNLGGASSLVQIWEKRLNQSGVSKPNTPRERIGSTSSSINENANAFSSENANALTGEEQCFDGPSGNEESLFPDWESSDHSLSPSGRSERDRVRVADIIKKLTATNPNQSPTPSFADDNEHEGYGSSVTGSPCRERECGNQQQQQQHSEQNQRVNCSLRIRGRRAYNDLLAQMKNDRHGELNNLVERGAVSKFPQRGRIQALLRLKLLQRGTAANDSTRQKSTASEVNNRQPQGSAIMQLRERFSSGAELRTAVQAEVANPKSPQRGTANKTTQLDNSATTDHLSKDTSNNKGHGNANHATESTQKSASQTRIDHNTEEAHPSSDVKVQETRPSSDVMTPHNDSQETTEASSSTIGSNLNEIMADRAETSNQQNAMAKSSNDETLDEEVESYQKYAETSYEEKVEEASNHNYGDEMEEEVEEIEQNCYETNYDWISEISRPRSYWEERRQAWYREMLETGSQNEDIRRLLERRTVSSFLSSDFRDRMDRLMESHRGTQTHLVSSQEREEDSHGLMAFLQARLHSTIASQDGRDAREEEEEESRNQNEEEEEEEEEDNADEQEQEHEEESLISGLYHEAGDYSNGSSSWSYRDIEAGYDFDRVVSTSPQPYQSQSFYPESRHSPSTNHHSIEMELIYDLRGHMELLYNEISELRKSIKGCMEMQIELQQSMKQEVQTVKKEEKKSNNRTPKKGNCCICYEMKVDSVLYRCGHMCTCLKCANELQWNSGKCPICRAKIEDVVRVYVDG 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01453 917 MobiDBLite consensus disorder prediction 383 407 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 429 482 - -
Gma15g01453 917 Pfam Zinc finger, C3HC4 type (RING finger) 862 910 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 62 83 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 778 794 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 62 88 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 227 324 - -
Gma15g01453 917 PANTHER BNAC05G24000D PROTEIN 1 916 - -
Gma15g01453 917 ProSiteProfiles Zinc finger RING-type profile. 865 904 IPR001841 -
Gma15g01453 917 MobiDBLite consensus disorder prediction 145 176 - -
Gma15g01453 917 CDD mRING-HC-C3HC5_NEU1 864 904 - -
Gma15g01453 917 SMART ring_2 865 903 IPR001841 -
Gma15g01453 917 MobiDBLite consensus disorder prediction 483 497 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 304 324 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 427 525 - -
Gma15g01453 917 PANTHER BNAC05G24000D PROTEIN 1 916 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 711 737 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 498 525 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 188 212 - -
Gma15g01453 917 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 839 916 IPR013083 -
Gma15g01453 917 SUPERFAMILY RING/U-box 864 909 - -
Gma15g01453 917 Coils Coil 702 742 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 699 740 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 273 287 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 254 269 - -
Gma15g01453 917 MobiDBLite consensus disorder prediction 778 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01453 Gma-Chr15 13158368 13162802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01453 865 913 C3H Transcription Factor Family AT3G06140 42.857 1.13e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01453 - - gmx:100796627 1700.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01453 15 13158368 13162802 Gma09g00443 09 4244174 4248299 GST