Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01439 ATGTTTGGTCAGAGCATGGATTCTGCAAGGAATGCGGGTGGTGTGGCAGGGACAGTGCTAATTCCCATGCGTTTTGTGTGGCCATATGGAGGAAGGAGTGTGTTTCTCAGTGGTTCTTTCACAAGGTGGTTGGAGCTTCTACCGATGTCGCCAGTGGAAGGTTGTCCAACTGTGTTTCAAGTGATTTATAACTTGCCACCCGGGTACCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCGCCATGATGAACATCAACCTTATGTACCTGGAGATTATGGGATAGTCAACACTGTCTTCTTGGCCACTGATCCTAACTACATACCTGTTTTACCCCCAGACGTTGCTTCTGGAAATAGCATGGATGTGGATAATGATGCTTTTCGACGAATGGTCCGTCTGACCGATGGAACACTGAGTGAGGTGCTGCCAAGAATATCAGATACTGATGTACAGATCTCCCGTCAGCGTATTTCTGCATTTCTATCTTCACACACCGCTTATGAATTACTTCCTGAGTCAGGCAAGGTTGTTGCTTTGGATGTTGATCTACCCGTGAAACAGGCATTTCATATATTGCATGAGCAGGGAATTTTCATGGCTCCTCTTTGGGACTTCTGCAAAGGGCAATTTGTTGGTGTTCTTAGTGCTTTGGATTTTATTTTAATTTTAAGAGAGCTGGGGAATCATGGATCTAATCTGACAGAAGAGGAGCTTGAAACACATACCATATCAGCTTGGAAAGAAGGAAAGTCGTACTTAAATAGACAGAACAATGGACATGGGACTATGTTTTCAAGACGATTTATCCATGCAGGACCATATGATAATCTGAAAGATATTGCCATGAAGATCTTGCAAAAGGAGGTTTCAACAGTTCCTATTATCCATTCATCTTCTGAAGATGCTTCATTTCCACAGTTACTACATCTTGCTTCACTTTCAGGAATACTTAAATGCATTTGTAGGTATTTTAGGCACTGCTCTAGTTCCCTGCCTGTACTTCAACTTCCAATCTGTGCAATACCTGTGGGCACGTGGGTGCCCAAAATTGGGGAATCAAATCGGCAGCCTCTAGCAATGTTGAGACCAACCGCTTCTCTTGCGTCAGCCCTAAATTTATTAGTTCAAGCCCAAGTAAGCTCAATACCAATAGTTGATGATAATGACTCATTACTGGATATATATTGTCGGAGTGACATAACAGCTTTGGCAAAGAACAGAGCATATGCACATATTAATCTTGATGAAATGACAGTTCATCAGGCTTTGCAGTTGGGCCAGGACGCATATAGTCCCTATGAGCTTAGAAGTCAAAGATGTCAGATGTGTTTGCGTTCTGATCCTCTGCATAAAGTGATGGAACGCTTGGCAAATCCAGGTGTCAGGCGGCTTGTCATCGTGGAAGCTGGCAGCAAGCGTGTAGAAGGCATTGTTTCATTGAGGGACATATTCAAGTTCTTCATTGGTGATTAG 1476 0.4316 MFGQSMDSARNAGGVAGTVLIPMRFVWPYGGRSVFLSGSFTRWLELLPMSPVEGCPTVFQVIYNLPPGYHQYKFFVDGEWRHDEHQPYVPGDYGIVNTVFLATDPNYIPVLPPDVASGNSMDVDNDAFRRMVRLTDGTLSEVLPRISDTDVQISRQRISAFLSSHTAYELLPESGKVVALDVDLPVKQAFHILHEQGIFMAPLWDFCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKSYLNRQNNGHGTMFSRRFIHAGPYDNLKDIAMKILQKEVSTVPIIHSSSEDASFPQLLHLASLSGILKCICRYFRHCSSSLPVLQLPICAIPVGTWVPKIGESNRQPLAMLRPTASLASALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKNRAYAHINLDEMTVHQALQLGQDAYSPYELRSQRCQMCLRSDPLHKVMERLANPGVRRLVIVEAGSKRVEGIVSLRDIFKFFIGD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01439 491 CDD E_set_AMPKbeta_like_N 22 100 - -
Gma15g01439 491 Gene3D - 330 489 IPR046342 -
Gma15g01439 491 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 11 490 - -
Gma15g01439 491 Pfam CBS domain 443 488 IPR000644 -
Gma15g01439 491 Pfam CBS domain 357 402 IPR000644 -
Gma15g01439 491 SUPERFAMILY CBS-domain pair 356 490 IPR046342 -
Gma15g01439 491 ProSiteProfiles CBS domain profile. 354 417 IPR000644 -
Gma15g01439 491 Gene3D Immunoglobulins 21 108 IPR013783 -
Gma15g01439 491 SUPERFAMILY E set domains 21 102 IPR014756 -
Gma15g01439 491 ProSiteProfiles CBS domain profile. 170 232 IPR000644 -
Gma15g01439 491 Pfam Glycogen recognition site of AMP-activated protein kinase 21 101 IPR032640 -
Gma15g01439 491 SMART cbs_1 358 406 IPR000644 -
Gma15g01439 491 SMART cbs_1 440 489 IPR000644 -
Gma15g01439 491 SMART cbs_1 176 225 IPR000644 -
Gma15g01439 491 ProSiteProfiles CBS domain profile. 436 491 IPR000644 -
Gma15g01439 491 SUPERFAMILY CBS-domain pair 157 327 IPR046342 -
Gma15g01439 491 PANTHER CBS DOMAIN, IMMUNOGLOBULIN E-SET-RELATED 11 490 - -
Gma15g01439 491 Gene3D - 147 329 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01439 Gma-Chr15 13016673 13029108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01439 - - gmx:100785692 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01439 15 13016673 13029108 Gma09g00431 09 4105324 4114673 GST
Gma17g00224 17 1840855 1848112 Gma15g01439 15 13016673 13029108 PCT
Gma15g01439 15 13016673 13029108 Gma17g00224 17 1840855 1848112 PCT