Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01435 ATGGAAGATATTGGAGGCAGTTCCTCAAACGACAACAACAACAATGGTGGCATCATCAAGGAACAGGACCGGTTGCTGCCAATAGCCAATGTTGGTCGGCTCATGAAGCGGATTCTTCCTCAGAACGCCAAAATCTCGAAGGAGGCGAAGGAGACGATGCAGGAATGTGTGTCGGAGTTCATAAGCTTCGTGACGAGTGAGGCTTCGGAGAAGTGCAGGAAGGAGAGGAGGAAGACAGTGAATGGTGATGACATTTGTTGGGCCTTGGCAACACTAGGCTTTGATAACTATGCTGAACCAATGAGAAGGTACTTGCATAGATATAGAGAGGTTGAGGTAGATCATAATAAGGTCAATCTTCAAGAAAAAGGGAATAGTCCTGAAGAGAAAGACGATGAATTATTTAAATTGAGCAATAGAGGGGTTGGGCTTTGA 435 0.4529 MEDIGGSSSNDNNNNGGIIKEQDRLLPIANVGRLMKRILPQNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDICWALATLGFDNYAEPMRRYLHRYREVEVDHNKVNLQEKGNSPEEKDDELFKLSNRGVGL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01435 144 SUPERFAMILY Histone-fold 22 129 IPR009072 GO:0046982
Gma15g01435 144 PRINTS CCAAT-binding transcription factor subunit A signature 53 71 - -
Gma15g01435 144 PRINTS CCAAT-binding transcription factor subunit A signature 72 90 - -
Gma15g01435 144 PRINTS CCAAT-binding transcription factor subunit A signature 91 109 - -
Gma15g01435 144 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 2 132 - -
Gma15g01435 144 Gene3D Histone, subunit A 17 140 IPR009072 GO:0046982
Gma15g01435 144 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 25 89 IPR003958 -
Gma15g01435 144 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 132 IPR027113 GO:0001228|GO:0006355|GO:0016602
Gma15g01435 144 ProSitePatterns NF-YB/HAP3 subunit signature. 56 72 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01435 Gma-Chr15 12929069 12929503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01435 3 132 CCAAT-HAP3 Transcription Factor Family AT2G47810 59.722 3.83e-56 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gma15g01435 CBFD_NFYB_HMF 9.7e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01435 K08065 - gmx:100794513 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01435 15 12929069 12929503 Gma09g00427 09 4020343 4021831 GST
Gma17g00231 17 1885494 1885865 Gma15g01435 15 12929069 12929503 PCT
Gma15g01435 15 12929069 12929503 Gma17g00231 17 1885494 1885865 PCT