Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01431 ATGTTGAATACCCTTCTCTGCAAATGCATCACTTTCGCAGCAACATCACGTTACCCTCTTTTCCACCACTACCCATTACCATTTTCTCTGCGTTTCTACACCACAACCACTTCAAATTCACGCTCCTTTGCGGTATCCTACCTCATCCACAATTTTGGGTTCTCCCCTGAATCTGCTTCCAAAGTTTCTGAAAACCACAAAATTTATTTCCGTACCCCGGAAAAGCCTGAGTCAGTAATCAGGTTCTTCAGAGACCACGGTTTTTCTGACTCCCAAATAAACAATATGGTTAGAAGGGTACCTAGGCTGATTTCCTGCAACCCTTGCAAAAGGGTATTGCCCAAGTTTGAATTTTTACTCTCGAAAGGTGTTTCTAGCTCTGAAATTGTTGACCTAATTAGTAAGTACCCTTTAATGTTGACTCGAAGCCTGAAGAATTTTATAGTGCCAACCTACGAATTGGTATATAGATTCTTGCAATCTGATAAGAACACTGTTGCTTGTATGTTTGCTAATTCATCTGTCTTTGGTAGCGGCTATCTTGTGGCACACAACGTCAGTGTGATGCTTAAGAATGGATTGAGTGAATCAAACATTGCAAGATTGCTTCGGTACCGTAGTAAGGCGGTGTTCCGTGCAACGGATATTCTTAAAGTGGTGAGGGAAGTAAAGGATTTGGGATTTGATCCTTCAAAAGTTGCTTTTGTTATGGCATTGCTAGCCATAAAACGTTACGATCAAAACTTGTGGAAGGAGAAAGTTGACGTCTTCAAGAAATGGGGTTGGTCTGATGAAACCTTTCTTGAAGCATTTAGGAGGCACCCTCACTGTATGTTGACATCCACTGACAAAATAAATATAGTGATGAATTTTTGGGTCAATCAGATGGGGTGGGATGCTTTAGCCCTTGTCAAAGGTCCAAAGATTTTCGGGTTGAGTATGGAGAAAACAATCATTCCAAGAGCCTCAATAGTGCAGTTGCTTCTTGAGAAAGGTTTGCGAAAAAGGAGTGCAAGCATAACTTGCCCCATTATGATACCTGAAAAGAGGTTCCTGAACAGGTTTATAAAATGTTTTAAGGAGGAGTCTTCTGATCTGTTAAAGTTGTATGCGGAAAAGCTGAATCTTGCGTATTCCAGGGAGAAGTCTGGAATGTTGTGCACCAAATAA 1170 0.4103 MLNTLLCKCITFAATSRYPLFHHYPLPFSLRFYTTTTSNSRSFAVSYLIHNFGFSPESASKVSENHKIYFRTPEKPESVIRFFRDHGFSDSQINNMVRRVPRLISCNPCKRVLPKFEFLLSKGVSSSEIVDLISKYPLMLTRSLKNFIVPTYELVYRFLQSDKNTVACMFANSSVFGSGYLVAHNVSVMLKNGLSESNIARLLRYRSKAVFRATDILKVVREVKDLGFDPSKVAFVMALLAIKRYDQNLWKEKVDVFKKWGWSDETFLEAFRRHPHCMLTSTDKINIVMNFWVNQMGWDALALVKGPKIFGLSMEKTIIPRASIVQLLLEKGLRKRSASITCPIMIPEKRFLNRFIKCFKEESSDLLKLYAEKLNLAYSREKSGMLCTK 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01431 389 Pfam mTERF 81 234 IPR003690 GO:0003690|GO:0006355
Gma15g01431 389 Pfam mTERF 244 351 IPR003690 GO:0003690|GO:0006355
Gma15g01431 389 SMART mt_12 59 89 IPR003690 GO:0003690|GO:0006355
Gma15g01431 389 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Gma15g01431 389 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Gma15g01431 389 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Gma15g01431 389 SMART mt_12 233 263 IPR003690 GO:0003690|GO:0006355
Gma15g01431 389 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Gma15g01431 389 Gene3D Transcription termination factor 3, mitochondrial 178 369 IPR038538 -
Gma15g01431 389 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 379 - -
Gma15g01431 389 PANTHER CGI-12 PROTEIN-RELATED 15 379 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01431 Gma-Chr15 12890721 12892013 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma15g01431 mTERF 9.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01431 K15032 - gmx:102663414 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01431 15 12890721 12892013 Gma15g01431 15 12890721 12892013 ECH
Gma15g01431 15 12890721 12892013 Gma09g00426 09 4006217 4007404 GST