Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01428 ATGATGTTTCCTTCCCCACGCTTCAAACCCTTTCTCTATCTGAACTCACTCACAAGAACACCACTGCTTCAACTTCAAACCCCGAAATCGAATCAAACTTTCCCACCATCACTCACTCCGAAACACACCTCAACCACTTCACAACACCACCCATTCAAGGTTTCCTACCTCGTAAACACTTGTGGCTTCTCCGTAGAAACCGCTCTCAAGATCTCCAAGTTCACCCAATTCAAAACCCCCGAAAAACCCGATTCAATCATCGCCTTATTCAGAAGCCACGGTTTCTCAAACACCCAGATAATCAGCATTATTAGAAGAGCACCCAATGTTCTCACATGCGACCCCCACAAAAGGATTTTCCCAAAGTTTGAATTTTTACGCTCCAAAGGGGCCTCAGGCTCCGACATTGTGGAACTGGTGACTAAGAGCCCCACAATCCTGTATGCGAACCTCGAGAATAATATTGTTCCTTCCTATGAGTTGGTGCGGAGGTTCCTTGAATCCGATAAGAAAACGATGGATTGCATTCGTGGTTGCGGATATTTCTTTGGTTCCGGTCGTGCGTCGCGGAATGTGATGTTGTTGATTGATGAGGGAGCCACGGACTCCGTCATCGCCTTTTTGTTACAGAGAAGGTTTTCTGTGATCTTGTGTTCTGGTTTTAAGGAGACTTTGGATGAAATTAAGGAAATGGGGTTTGAGCCTTTCAAGAAGAAGTTCGGGCTGGCGCTGCTTGCGAAAAAGATTGTTCCGAAATCGCACTGGGAAGCTAAAGTTGATGTCTTTAAGAGCTGGGGTTGGTCTGAAGAATTGGTTATTGGTATGTTCAAGAGGCAGCCCCTCTTTATGTTAGCGTCCCAAGATAAGATTGATCGGGTTATGAGATTTTGGGTTAAGCAGTTAGGTTGGGATTCTTTGGCCCTTGCCAAAAAGCCAGAGATTTTTGGATTTAGTTTGGAGAGAAGGATCATTCCAAGGGCTCTTGTTGTCCAGTATTTAGTCGCTAAAGGCTTGAGGAAAAAGAGTGCCAGCATGATTGTCCCATTTGCTGTTTCTGATAAGGAGTTTCTTGAAAAGTATGTGATGCGATTTAAGGAGGAAGAAGCGGAACTATTAAAGCTGTACCAGGGAAAAATGAGTGGTCATGGAAATAAGGAGGATGGTGCAGCTCCTTTAACCGTAGTGTAA 1188 0.447 MMFPSPRFKPFLYLNSLTRTPLLQLQTPKSNQTFPPSLTPKHTSTTSQHHPFKVSYLVNTCGFSVETALKISKFTQFKTPEKPDSIIALFRSHGFSNTQIISIIRRAPNVLTCDPHKRIFPKFEFLRSKGASGSDIVELVTKSPTILYANLENNIVPSYELVRRFLESDKKTMDCIRGCGYFFGSGRASRNVMLLIDEGATDSVIAFLLQRRFSVILCSGFKETLDEIKEMGFEPFKKKFGLALLAKKIVPKSHWEAKVDVFKSWGWSEELVIGMFKRQPLFMLASQDKIDRVMRFWVKQLGWDSLALAKKPEIFGFSLERRIIPRALVVQYLVAKGLRKKSASMIVPFAVSDKEFLEKYVMRFKEEEAELLKLYQGKMSGHGNKEDGAAPLTVV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01428 395 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 19 381 - -
Gma15g01428 395 SMART mt_12 207 234 IPR003690 GO:0003690|GO:0006355
Gma15g01428 395 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Gma15g01428 395 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Gma15g01428 395 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Gma15g01428 395 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Gma15g01428 395 MobiDBLite consensus disorder prediction 26 47 - -
Gma15g01428 395 PANTHER CGI-12 PROTEIN-RELATED 19 381 IPR003690 GO:0003690|GO:0006355
Gma15g01428 395 Pfam mTERF 254 357 IPR003690 GO:0003690|GO:0006355
Gma15g01428 395 Pfam mTERF 88 291 IPR003690 GO:0003690|GO:0006355
Gma15g01428 395 Gene3D Transcription termination factor 3, mitochondrial 187 373 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01428 Gma-Chr15 12870894 12872772 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma15g01428 mTERF 1.2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01428 K15032 - gmx:102666622 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01428 15 12870894 12872772 Gma15g01428 15 12870894 12872772 ECH