Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01420 ATGTGTGGAGGTGCTATCATCTCAGACTTCATTGGTGTGAAGCGTGGCCGCAACCTCGCCGCGCAGGAACTGTGGTCCGAGCTTGACCCTTTCTCTGACCTCCTTGGCTTCGATACCACCACCACCACCACCAACCAACCACCCCTTCCAGACAAAAAAGTGGTGTCATCATGTGAGAAGAAGAAGAAGAAAAGTGTGAGTGCAGAAAAGAAGAGTGGTGGGCGAGCTCGGAAGAACGTGTACAGAGGAATCAGGCAAAGGCCGTGGGGCAAGTGGGCCGCGGAAATAAGGGACCCACATAAGGGCGTCCGCGTCTGGCTCGGCACCTTCCCCACCGCCGAGGAAGCCGCCCGAGCCTACGACGACGCCGCCAAGCGCATCCGCGGCGACAAGGCCAAGCTCAACTTCCCGGCCACCGCTCCGCCACCCTCCAAAAAACAACGCTGCCTCAGCCCTGACACCACCACCGAACAAAGCAGCAGCTCACAATCCACCACTGGATCCACCGGATCGCCGCCTTCCGCCGCCTTCCACGGCGGAGGAGATGAACTCGACCTGAAACAACTTGAACGGTTTCTAGGGTTGGACAACATGGGTGCTGAGTGGGACAACATGGATGACCTGTGGATGCTGGACGACGTCGTTGTGCCCAACCGTCACTTAATTTACTAG 672 0.5804 MCGGAIISDFIGVKRGRNLAAQELWSELDPFSDLLGFDTTTTTTNQPPLPDKKVVSSCEKKKKKSVSAEKKSGGRARKNVYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFPTAEEAARAYDDAAKRIRGDKAKLNFPATAPPPSKKQRCLSPDTTTEQSSSSQSTTGSTGSPPSAAFHGGGDELDLKQLERFLGLDNMGAEWDNMDDLWMLDDVVVPNRHLIY 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01420 223 Pfam AP2 domain 80 129 IPR001471 GO:0003700|GO:0006355
Gma15g01420 223 PANTHER EREBP TRANSCRIPTION FACTOR 1 158 - -
Gma15g01420 223 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Gma15g01420 223 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Gma15g01420 223 SUPERFAMILY DNA-binding domain 80 138 IPR016177 GO:0003677
Gma15g01420 223 MobiDBLite consensus disorder prediction 54 76 - -
Gma15g01420 223 MobiDBLite consensus disorder prediction 39 82 - -
Gma15g01420 223 CDD AP2 81 139 IPR001471 GO:0003700|GO:0006355
Gma15g01420 223 PANTHER DNA-BINDING DOMAIN 1 158 IPR044808 GO:0003700|GO:0009873
Gma15g01420 223 Gene3D AP2/ERF domain 80 139 IPR036955 GO:0003700|GO:0006355
Gma15g01420 223 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Gma15g01420 223 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Gma15g01420 223 MobiDBLite consensus disorder prediction 148 173 - -
Gma15g01420 223 MobiDBLite consensus disorder prediction 133 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01420 Gma-Chr15 12737007 12739316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01420 1 215 AP2-EREBP Transcription Factor Family AT3G16770 46.183 3.77e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma15g01420 AP2 5.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01420 K09286 - gmx:100779626 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01420 15 12737007 12739316 Gma15g01420 15 12737007 12739316 ECH