Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01417 atgaacttccataaaagttcacatggagctattaatgtgcaaagatactctttggacagatttgcagaggtgctgcattgtggaattctcaccatctcgatcacttatcttggtgttccggtaggcattaatgctcgcaaagaggacacttggaggatagtaatccaaaaaatgcaaagcaagctaactccgtggaggcaaaggcatctctcaatccgaggacgaGCTTCAGAGAAGAAACTTTCAAACCCAATGAGGGAGATAAAGGTGCAGAAGCTCGTCCTCAATATCTCCGTTAGTGAGAGTGGAGATCATCTCACCAGAGCCACTAAGCTTGGTTTTGACAGCAAGGTACACTTATTCGTTCCTTTGGGATTAGAAGAAATGAGAAGATTGCATGCTATGTTATTGTCAAAGGAGCATATTGATTTGAGAATCAAAAAGAGTAGTGGGTTTTCAATGTACAGAGGAGTGACAAGGCCAGATCGATATGTTGCATCGTTTGGCGAGTTTTCCTATCATTATTCAAAATGGAGATCCAGTGTGCCATTTGTTGAGCAATTGCAAGCTTTCCAAGAACTTATGAATGAGGGAAAGCCTCCTCCTACACCTTTCTTCTTCTTTCTCCTTCCTTGGCCGCGACCTCCTCCGTCGCGGCCCCCTTCTTCCTTCCCATCCACTGCACCCTAA 690 0.3 MNFHKSSHGAINVQRYSLDRFAEVLHCGILTISITYLGVPVGINARKEDTWRIVIQKMQSKLTPWRQRHLSIRGRASEKKLSNPMREIKVQKLVLNISVSESGDHLTRATKLGFDSKVHLFVPLGLEEMRRLHAMLLSKEHIDLRIKKSSGFSMYRGVTRPDRYVASFGEFSYHYSKWRSSVPFVEQLQAFQELMNEGKPPPTPFFFFLLPWPRPPPSRPPSSFPSTAP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01417 229 PANTHER 60S RIBOSOMAL PROTEIN L11 76 112 - -
Gma15g01417 229 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 76 112 IPR002132 GO:0003735|GO:0005840|GO:0006412
Gma15g01417 229 Gene3D - 77 113 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01417 Gma-Chr15 12698787 12708203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01417 76 112 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 86.486 2.59e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01417 - - gmx:121173622 277.715