Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01407 atggcgacagcaggtggcagaaaCAAAGCTGATAGCCCTAGTGCCCTTGTGTTTCAAAGCTGCCACTTCACTGGAGAACCCGAATTGGCTACTGCAGAACCTAAGGTAGAATTCCTTGGAAGGCCATGGATGTCATACTCTAAGGTGGTGATCATGGACTCTCAGATTGAAAATGTCTTTTTACCAGATGGGCCCTATGAATGCCCAAATTCCTACAGGGCTGGCCCAAAGTCCTACAGGGTCAACCAAAGCATGAGGATGGTCGGCTAA 270 0.4407 MATAGGRNKADSPSALVFQSCHFTGEPELATAEPKVEFLGRPWMSYSKVVIMDSQIENVFLPDGPYECPNSYRAGPKSYRVNQSMRMVG 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01407 89 Pfam Pectinesterase 2 65 IPR000070 GO:0030599|GO:0042545
Gma15g01407 89 PANTHER PECTINESTERASE 1 68 - -
Gma15g01407 89 PANTHER PECTINESTERASE 1 68 - -
Gma15g01407 89 Gene3D - 1 86 IPR012334 -
Gma15g01407 89 SUPERFAMILY Pectin lyase-like 3 72 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01407 Gma-Chr15 12604467 12604965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01407 1 80 Carbohydrate Esterase AT1G53830 35.802 2.63e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01407 K01051 - gmx:100785214 115.161