Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01391 ATGGAAGGTAACAAGGACGAAGCATTACGCTGCGTTCGCATCGCCGAAGAAGCAATCGCGTCGGGAAACAAAGACCGCGCCCTCAAATTCCTCAGAATCGCGCAACGCCTCAACCGCGATTTGCCCCTCCAGTCCCTGCTCGAAAAGTGCGACCGCTTCGATTCGCACTCCGCCGCCGCTGCCGCCTGCGGCGGCAGCGGCGCCTCTCCGGCGAACGGTCACTCTCCGCGTCGCGAGGGTTTGAACGGGGAGAGGAATTACACGGAGGAAAACGTGCAGCTAATTAGAGAAATCAAGGGAAAGAGCGATTACTATGCGATTCTGGGATTGGAAAAGAGTTGCTCCGTGGAAGAGATTCGAAGAGCGTATCGGAAGCTCTCTCTGAAGGTTCATCCCGATAAGAACAAAGCTCCAGGCTCCGAAGATGCGTTCAAGAAGGTTTCGAAGGCGTTCAAGTGTTTGAGCGACGACGGCTCAAGAAGGATGTACGACCAAACCGGAACCGGCACCGACGATTATGAGAGCACCGAGGTAAACACCTTCTGGCGAAGAAGAAGAAGAAGGACGACGACAACGCGCGATTTCTTCGGAGACGAGTTCGATCCGGACGAGATATTCAGGGCGTTCTTCGGACACTCCGACGTGTTCGGGAGAAACAACAATGTTTACCGGACACGCGGGATGGGGAATCCGAATCATCAGCATAGGCACGAATTCAATGCTGGATCGGGAGGGAGGCATCACAATGTGATGCTTCTGATTCAGCTCTTGCCGTTTTTGATTATTGTGCTGCTCGCGTACTTGCCGTTTTCGGAGCCTGAGTATTCGTTACACAAGCACTACAACTACCAGATTCCCAAGACCACGGAGCGGCTCGAGGTTCAGTTCTTTGTGAAGTCGACCGCGTTTGATGCGAATTATCCACTAGGGAGTGATGCCCGTGAGGCGATTGAGGAGAGTGTTATAAAGGATTATAGGAGTATGCTGAGGAGATACTGTCAGTCGTGGCATGAAGCAAAAGTGCCTACATGGAATTTTTTTCTCCTTGGCTTAAGGAAGTCTTGTATCAGTTGCTGA 1077 0.5227 MEGNKDEALRCVRIAEEAIASGNKDRALKFLRIAQRLNRDLPLQSLLEKCDRFDSHSAAAAACGGSGASPANGHSPRREGLNGERNYTEENVQLIREIKGKSDYYAILGLEKSCSVEEIRRAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTGTDDYESTEVNTFWRRRRRRTTTTRDFFGDEFDPDEIFRAFFGHSDVFGRNNNVYRTRGMGNPNHQHRHEFNAGSGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYNYQIPKTTERLEVQFFVKSTAFDANYPLGSDAREAIEESVIKDYRSMLRRYCQSWHEAKVPTWNFFLLGLRKSCISC 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01391 358 PANTHER AT29763P-RELATED 1 334 - -
Gma15g01391 358 ProSiteProfiles dnaJ domain profile. 103 167 IPR001623 -
Gma15g01391 358 SUPERFAMILY Chaperone J-domain 99 213 IPR036869 -
Gma15g01391 358 MobiDBLite consensus disorder prediction 64 86 - -
Gma15g01391 358 SMART dnaj_3 102 159 IPR001623 -
Gma15g01391 358 Pfam Domain of unknown function (DUF1977) 271 340 IPR015399 -
Gma15g01391 358 Pfam DnaJ domain 103 164 IPR001623 -
Gma15g01391 358 Gene3D DnaJ domain 100 222 IPR036869 -
Gma15g01391 358 PRINTS DnaJ domain signature 159 178 IPR001623 -
Gma15g01391 358 PRINTS DnaJ domain signature 123 138 IPR001623 -
Gma15g01391 358 PRINTS DnaJ domain signature 105 123 IPR001623 -
Gma15g01391 358 PRINTS DnaJ domain signature 139 159 IPR001623 -
Gma15g01391 358 CDD DnaJ 103 156 IPR001623 -
Gma15g01391 358 PANTHER CHAPERONE PROTEIN DNAJ 49 1 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01391 Gma-Chr15 12432154 12437274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01391 98 164 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.211 4.88e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01391 K09518 - gmx:100820432 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01391 15 12432154 12437274 Gma15g01391 15 12432154 12437274 ECH