Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01372 ATGGGACAAGAATCAGATTACAAAACCCAGTTGGTGTTGGAGGTTTGCTCCATTTCCACACGTTCTGTTGTGTGTGTTCATAGACATGTCTCAAACCATCATGTTAAGCCACCTTTCATAGATTGGTATTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTGAGCACCATTCGCAAGCAATACCATAAACTTGCCTTGCAACTTCATCCGGACAAGAATACACACCCGAAGGCTGAAATTGCATTCAAGCTTGTCTCTGAGGCTTGTATATGTCTGTCTGATGCTGCAAAAAGGAAAGCTTTTGACTTAAAGAGACACAAGAATTTCTGCTTTGAGTGCAATAGAATCCCTTATACATCCAAACGTGTCCCTAACAATTCCAATGGTTCAAGTTTCAAGACATGGAATATCATTTGGGACTCAAGATCTTACAAAGTTTGGAGAAATATTAGGAACATGAAAGATAGACTGAAGGAGGAGGCCAAGGTGATAGAGAACTGTCTTAGGAAAAATTCAATGGCAAAGAAAGAATCTCCCCTCTACAATCCAGATGACTATAGACATGGAAGCAGTTTCAAGCATAAAGTTGAGAGAGAAATCCCTGTTTTTAATCCATTAAAAAACTTGCACAAAGGGTACCCTCATTTGAGGGGCAATGTTTACAAGAATTCTGAGACATGTTGGTGGTACTTGCATACACAAAATCTTGTGCACAATGACAAGGGGGAAGCCAAGTATGCATCCCCGGTTTTTGAGGTCAGATCACAAAGGAGCATGCTCTCAACAAGTAAATTTGCTTATGTCCCATCATAA 813 0.4047 MGQESDYKTQLVLEVCSISTRSVVCVHRHVSNHHVKPPFIDWYCILGVEENAGVSTIRKQYHKLALQLHPDKNTHPKAEIAFKLVSEACICLSDAAKRKAFDLKRHKNFCFECNRIPYTSKRVPNNSNGSSFKTWNIIWDSRSYKVWRNIRNMKDRLKEEAKVIENCLRKNSMAKKESPLYNPDDYRHGSSFKHKVEREIPVFNPLKNLHKGYPHLRGNVYKNSETCWWYLHTQNLVHNDKGEAKYASPVFEVRSQRSMLSTSKFAYVPS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01372 270 SMART dnaj_3 40 97 IPR001623 -
Gma15g01372 270 SUPERFAMILY Chaperone J-domain 29 107 IPR036869 -
Gma15g01372 270 Coils Coil 150 170 - -
Gma15g01372 270 CDD DnaJ 41 88 IPR001623 -
Gma15g01372 270 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 263 - -
Gma15g01372 270 ProSiteProfiles dnaJ domain profile. 41 105 IPR001623 -
Gma15g01372 270 PANTHER BNAC03G44070D PROTEIN 4 263 - -
Gma15g01372 270 PRINTS DnaJ domain signature 43 61 IPR001623 -
Gma15g01372 270 PRINTS DnaJ domain signature 61 76 IPR001623 -
Gma15g01372 270 PRINTS DnaJ domain signature 77 97 IPR001623 -
Gma15g01372 270 Gene3D DnaJ domain 40 157 IPR036869 -
Gma15g01372 270 Pfam DnaJ domain 41 102 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01372 Gma-Chr15 12249595 12251461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01372 41 102 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 46.970 1.47e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01372 - - gmx:100778573 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01372 15 12249595 12251461 Gma15g01372 15 12249595 12251461 ECH
Gma15g01372 15 12249595 12251461 Gma09g00371 09 3475171 3476488 GST
Gma17g00273 17 2205553 2206755 Gma15g01372 15 12249595 12251461 PCT
Gma15g01372 15 12249595 12251461 Gma17g00273 17 2205553 2206755 PCT