Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01353 ATGAATCTCAGCAACGGCAAGGGATCCACTTCGAGTTCTCCTCTGAAAGCCGGAGATTCTGTCTCCGACCAGTTTCCGGCGGGTCTCCGGGTGCTGGTGGTGGATGATGACCCCACTTGCCTTATGATCCTTGAGAGGATGCTCCGTGCTTGTCTCTATGAAGTGACGAAATGCCAGCGAGCTGAGGTTGCATTGTCTCTCTTGAGAGAGAACAAAAACGGGTTTGATATCGTTTTAAGCGATGTGCATATGCCAGATATGGATGGATTTAAGCTTTTGGAGCATATTGGGTTGGAGATGGACCTTCCGGTTATTATGATGTCAGCTGATGATGGGAAACATGTTGTGATGAAAGGGGTGACACATGGTGCCTGTGATTACCTGATTAAACCTGTTCGGATTGAGGCTTTGAAGAATATATGGCAGCATGTGATTCGGAAGAGAAAGAACGGTTTGAGAGATGTGGAGCAATCGGGTAGCGTGGAAGAAGGAGATCAGCCTCCAAAGGTATCTGATGATGGAGATTACTCGTCTTCTGTGAATGAAGCCAGAAGCTCTAAGAAGAGGAGGGACGAGGACGAGGAAGGAGATGAGAAGGATGATTCCTCCACGTTGAAGAAGCCGCGAGTTGTTTGGTCTGTTGAGCTTCATCAACAGTTTATGGCTGCTGTGAATCAACTTGGAATTGATAAGGCTGTTCCTAAAAAGATTTTGGAATTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCTAGCCACCTCCAGAAATACCGTTTGTATCTTAGAAGGCTGAGTGGAGTTTCACAGCAGCAGGGTAACTTGAACAACTCCTTCATGAGCTCACAAGAAGCAACATTTGGGGGAACCTCAATCAATGGAATTGATCTTCAAACTCTTTCAGCTGCTGGCCAGTTCCCATCACAAAGTCTAGCCAAGCTTCAAGCCACGGGACTTGGCAGGACAACTGCTAAAGCTGGTGTGCCTATGCCTCTATCTGATCAAAAAAACCTTTTCAGTTTTGAGAACCCAAGATTAAGATTTGGAGAAGGGTCACTACAACATTTAAGCAACAGTAAGCCTATAAACTTGCTTCATGGAATTCCAACCAACATGGAGCCAAAACAACTCGCCAATTTGCACCAATCTACCCAACCCCTTGGTAGCTTGAATATGCGAGTCAATGCTCCTGTCACACAGAACAACCCTTTGTTGATGCAGATGGCTCAGTCTCAACCAAGAGGTCAGATGCTAGGTGAAAATGCTGGTTCTCATGTAACCAGGTTTCCGTCATCTTTGGTGCAGCCTACAGTATCAAATGGTATTTCTAATGGTGTTTTGGGAAATGGGATTGCTGGCACCAGCAACATAACTACTTATAATCCAGTTCAACAAAACTCGTCATTGTTGAGTTTTCCCATGAACCAAACAAATGAAATATCTGTCAGTAATTTCCCTCTTAGAAGCAGTCCAGGTATAACTAGTATCACAAATAAAGGTATGTTTCATGAAGAAGGTACCTCTGGTATTAAAGGACCTGGTGGATTTGTTCAAGGGTATGACATGTTTAATGAACTCCACCATCAGAAGTCCCATGATTGGGACTTAACAAACACTGGCATGACATATGATGCTGCTCACCATGCAAATCCTTTACAAGGTAACATTGATGTCTCACCATCAGTTTTGGTCCATCAGAGTTTTCCCACCATGCACCAGACTGTACAAAATAGAGATACTACTTCAATTGGAAAAGCTATGTTCTCCACAGGTGAAGGCATGCATCAAAGTAATCTCCAAAATGTTGGTCAACACCACAATAACCTTCTTCTTGACAATTCAGTAAGGGTTAAGGCTGAAAGAATTCCTGATCCTAGCTGCCAGATTAATAACCTCTTCGCTGATCAATATGGTCAGGAGGATCTTGTCAGTGCATTTCTGAAACAGCAAGAAAGCATTGGAACTTCTGAAAATGAGTTTGACTTTGATGGATATTCCTTAGACAACATTCCGAATTGGCTAACTCTTACAAAAGTGACCAACCACGGTCTTGATTCTGCACCCAATTCTAGCCCAATCATTACCTGGGTGACAAATGCTGCTGTGACTCCAAAAGAAGACCAATTGAAGATAAATGAGGAGGACAAAGGAGACATTTGGACAAGGGTTAGTAAGCCAACTAGAGACAGAGGTAAGAGGAAGATTTATACTGGATCTACTTCTGATGTTAATTGTATGAATGGGTTTGAGGCACTTAGAGTTTTGAATGACTCTACAGTGGCCCCTGATAGGGGTCCAATATGGATTAACTAG 2313 0.4336 MNLSNGKGSTSSSPLKAGDSVSDQFPAGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEVALSLLRENKNGFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKHVVMKGVTHGACDYLIKPVRIEALKNIWQHVIRKRKNGLRDVEQSGSVEEGDQPPKVSDDGDYSSSVNEARSSKKRRDEDEEGDEKDDSSTLKKPRVVWSVELHQQFMAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQQQGNLNNSFMSSQEATFGGTSINGIDLQTLSAAGQFPSQSLAKLQATGLGRTTAKAGVPMPLSDQKNLFSFENPRLRFGEGSLQHLSNSKPINLLHGIPTNMEPKQLANLHQSTQPLGSLNMRVNAPVTQNNPLLMQMAQSQPRGQMLGENAGSHVTRFPSSLVQPTVSNGISNGVLGNGIAGTSNITTYNPVQQNSSLLSFPMNQTNEISVSNFPLRSSPGITSITNKGMFHEEGTSGIKGPGGFVQGYDMFNELHHQKSHDWDLTNTGMTYDAAHHANPLQGNIDVSPSVLVHQSFPTMHQTVQNRDTTSIGKAMFSTGEGMHQSNLQNVGQHHNNLLLDNSVRVKAERIPDPSCQINNLFADQYGQEDLVSAFLKQQESIGTSENEFDFDGYSLDNIPNWLTLTKVTNHGLDSAPNSSPIITWVTNAAVTPKEDQLKINEEDKGDIWTRVSKPTRDRGKRKIYTGSTSDVNCMNGFEALRVLNDSTVAPDRGPIWIN 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01353 770 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 642 IPR045279 GO:0009736
Gma15g01353 770 CDD REC_typeB_ARR-like 31 145 - -
Gma15g01353 770 Gene3D - 204 266 - -
Gma15g01353 770 SMART REC_2 29 141 IPR001789 GO:0000160
Gma15g01353 770 MobiDBLite consensus disorder prediction 152 205 - -
Gma15g01353 770 Gene3D - 29 159 - -
Gma15g01353 770 PIRSF RR_ARR_type-B 5 664 IPR017053 GO:0003677|GO:0003700|GO:0009736
Gma15g01353 770 SUPERFAMILY CheY-like 28 149 IPR011006 -
Gma15g01353 770 SUPERFAMILY Homeodomain-like 204 264 IPR009057 -
Gma15g01353 770 ProSiteProfiles Response regulatory domain profile. 30 145 IPR001789 GO:0000160
Gma15g01353 770 MobiDBLite consensus disorder prediction 182 205 - -
Gma15g01353 770 Pfam Response regulator receiver domain 31 139 IPR001789 GO:0000160
Gma15g01353 770 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 642 - -
Gma15g01353 770 Pfam Myb-like DNA-binding domain 209 259 IPR001005 -
Gma15g01353 770 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 207 260 IPR006447 GO:0003677
Gma15g01353 770 MobiDBLite consensus disorder prediction 152 170 - -
Gma15g01353 770 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 263 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01353 Gma-Chr15 12091578 12096326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01353 63 671 Response Regulator Gene Family AT3G16857 48.550 7.68e-169 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Gma15g01353 Response_reg 2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01353 - K14491 gmx:100809583 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01353 15 12091578 12096326 Gma15g01353 15 12091578 12096326 ECH
Gma15g01353 15 12091578 12096326 Gma09g00359 09 3378768 3382785 GST
Gma17g00282 17 2283557 2287802 Gma15g01353 15 12091578 12096326 PCT
Gma15g01353 15 12091578 12096326 Gma17g00282 17 2283557 2287802 PCT