Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01319 ATGGATGACTTGTACTATGCAGGTTTCAGCACAGATGACAATTCTAGTTCATCCAATGATTTTTTCTGGGATAATGAGGGACTGAATGATGTGAGAAAGTTTCAATTTTCTGGAGTAGAAGATCATGAAGAGTATGGGGGAATTGACTCATTTTACTCAAATTTTGGGTTCTTCCCAGATGATCCATCAGAAGAAGGGTACCTTCTATCCACTAATCACCAAAAGTATCACCAAATATTTGATGATTATGGACTATTGGATGATAACCTTCAGTTTGACATGGTATCTCCACCACTCCAATTTGATGAACAATATAGAACCATGGTTCCATTGTGTAACTCAACAAAGGACATGCCACACTCAACTACCCCTTTAGCCTCACTTGAGATCTTGAAGAGCTATGGCAAAGGCTTCAAGAGGTTTTGGAATGAAGGCAACAACACCATGCAGCCAATTGATGATGAGACTTTGGCCACAGATGAAGTTATTGCTGGGAGAAACCTATCAACAGAAGATCTCATGAGGATAGCAGGAACAAGGTTCATCCAatcatcatcatcgtcttcggactcggaatctttgcctttcttggagAATCACCCTTTTGGCTTTTCTTTCTCTGGATTCTCTGATGAAGAGAAAGAGGATCTGGAACTTGCTGAGTccctcttggcttgtgctgagaaagttggcaacaaacagtttgaacgtgcaaGCAAATTGCTCAGTCACTGTGAATCATTGTCTTCCAAAACCGGGAACCCCGTTAAGAGAATTGTTCATTATTTTGCAGAAGCACTTCGCCAGCGAATAGATACCGAAACAGGAAGAGTTTCATCCAAGGACTTGCAAAAGGGTCAACCATTTGATCCTGAAGAAGCAGCCAAGGAACTAACCCCTGCTATTCTTGCATTTGTTGAAGACCTTCCCTTTTGTAAAGTTGCACAGTTCACTGCAGCTCAAGCTATAATAGAAGATGTAGCAGAAGCGAAGAGGATTCACATTATTGATCTTGAAATCAGAAAGGGAGGGCAGTGGACTATCGTAATGCAAGCCCTTCAGTTAAGACATGAATGTCCAATTGAGCTTCTGAAGATAACCGCTGTAGAAAGTGGAACCACTAGACACATAGCTGAGGACACTGGTCAGAGACTAAAGGATTATGCTCAAGGTTTGAACATACCCTTCTCTTTCAACATAGTTATGGTATCAGGCATGTTACATCTAAGAGAAGATCTTTTTGAGATTGACCCTGAGGAAACAATTGCTGTTTATTCTCCTTATTGCCTTAGAACCAAGCTTCAGCAATCAGACCAGCTTGAAACCATCATGAGAGTGATTAGAACCATAAGTCCTGATGTGATGGTGGTAGCTGAAATTGAGGCAAACCACAACTCTAAATCTTTTGTAAACCGTTTCGTTGAGGCTCTTTTCTCCTTCAGTGCATTCTTTGATTGTTTTGAGGCTTGCATGAAAGGGGATGAGAAGAACCGAATGATTATAGAATCAATGTACTTCAGTCCTGGAATCAGAAACATTGTGGCTGCAGAAGGAGCCGAAAGAAGGAGCAGGAGTGTGAAGATTGATGTGTGGAGGGCCTTCTTCTCACGCTTTGGAATGGAGGAGAAAGAATTGAGCACTTTGTCTTTATACCAAGCGGAATTGGTGGCTAAGAGATTTCCTTGTGGAAATTTTTGCACATTTGAAAGGAATGGCCATTGCCTTCTTATTGGGTGGAAAGGGACACCAATTAACTCTGTTTCTGTCTGGAAATTCCTTTGA 1782 0.39 MDDLYYAGFSTDDNSSSSNDFFWDNEGLNDVRKFQFSGVEDHEEYGGIDSFYSNFGFFPDDPSEEGYLLSTNHQKYHQIFDDYGLLDDNLQFDMVSPPLQFDEQYRTMVPLCNSTKDMPHSTTPLASLEILKSYGKGFKRFWNEGNNTMQPIDDETLATDEVIAGRNLSTEDLMRIAGTRFIQSSSSSSDSESLPFLENHPFGFSFSGFSDEEKEDLELAESLLACAEKVGNKQFERASKLLSHCESLSSKTGNPVKRIVHYFAEALRQRIDTETGRVSSKDLQKGQPFDPEEAAKELTPAILAFVEDLPFCKVAQFTAAQAIIEDVAEAKRIHIIDLEIRKGGQWTIVMQALQLRHECPIELLKITAVESGTTRHIAEDTGQRLKDYAQGLNIPFSFNIVMVSGMLHLREDLFEIDPEETIAVYSPYCLRTKLQQSDQLETIMRVIRTISPDVMVVAEIEANHNSKSFVNRFVEALFSFSAFFDCFEACMKGDEKNRMIIESMYFSPGIRNIVAAEGAERRSRSVKIDVWRAFFSRFGMEEKELSTLSLYQAELVAKRFPCGNFCTFERNGHCLLIGWKGTPINSVSVWKFL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01319 593 Pfam GRAS domain family 220 591 IPR005202 -
Gma15g01319 593 ProSiteProfiles GRAS family profile. 210 591 IPR005202 -
Gma15g01319 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 591 IPR005202 -
Gma15g01319 593 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 37 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01319 Gma-Chr15 11710089 11712171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01319 211 592 GRAS Transcription Factor Family AT3G03450 30.909 1.50e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma15g01319 GRAS 9.7e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01319 - - gmx:100798926 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01319 15 11710089 11712171 Gma15g01319 15 11710089 11712171 ECH
Gma15g01319 15 11710089 11712171 Gma07g00522 07 4996207 5012452 PCT
Gma15g01319 15 11710089 11712171 Gma16g00221 16 2379476 2396300 PCT
Gma07g00522 07 4996207 5012452 Gma15g01319 15 11710089 11712171 PCT
Gma16g00221 16 2379476 2396300 Gma15g01319 15 11710089 11712171 PCT