Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01316 ATGCGCACATGCGATGCGCATACAAAGGCTTACGCCCCAGAGACAGAGCCATCTGTCGGGTTTTCACCTTCGGAGTCTCCGAACCGTGAAAACCCAACATCATCATTATCTAAGGACGAGTCACATTCTTCTTCCTCCTCCGGCAAGGACGACCGTTCATACACGTCGTTCTCGACAGCATTCTCGAATGCATTCGGGGACATCCTCAAGGGAACCCTACGAGGCAACACCATCACGATGCCGGAACACGATCTCACGGCCACCGACCACCACTCGGTTAAGGATATCTGCTCCCACACGGACTACCCTGACGTGTGTGTCTCCACCATCACACCATTCCTCGGCCAAAATTTCGACCTGATGAACGTCCTCGAGGCCGCCATTAAGGCCTGCTCCTACCAGGCCAAGTTCACCATCTCCGTCGTCGCCAAGCACATGAAGGTCTCGCCGGAGATTGCCGCAGCACTTGGGGACTGCAAGGAGCAGTACAGCGACGCCTTGGAGAACCTCCACAGGGCCATGGATGCCATTCAGTCGCAGGATCTCGGCACCGTTACCACTATGCTTAGCGCTGTTATGGCGGATGTTTCTGCGTGCGAGAGTGGGTTTGAGGAGCATAAGGTGGCATCACCCATGGCTCATTCTGAAGGCATGGTTAGCATTACTGCCAGTATTTGTCTTTCCATTGCTTCGTTGATTCCCCATTAG 708 0.5438 MRTCDAHTKAYAPETEPSVGFSPSESPNRENPTSSLSKDESHSSSSSGKDDRSYTSFSTAFSNAFGDILKGTLRGNTITMPEHDLTATDHHSVKDICSHTDYPDVCVSTITPFLGQNFDLMNVLEAAIKACSYQAKFTISVVAKHMKVSPEIAAALGDCKEQYSDALENLHRAMDAIQSQDLGTVTTMLSAVMADVSACESGFEEHKVASPMAHSEGMVSITASICLSIASLIPH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01316 235 CDD PMEI-like_2 92 233 - -
Gma15g01316 235 TIGRFAM PME_inhib: pectinesterase inhibitor domain 87 230 IPR006501 GO:0004857
Gma15g01316 235 MobiDBLite consensus disorder prediction 19 53 - -
Gma15g01316 235 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 92 233 IPR035513 -
Gma15g01316 235 Coils Coil 160 180 - -
Gma15g01316 235 SMART PMEI_2 88 229 IPR006501 GO:0004857
Gma15g01316 235 PANTHER PECTINESTERASE INHIBITOR-LIKE 78 234 - -
Gma15g01316 235 MobiDBLite consensus disorder prediction 1 53 - -
Gma15g01316 235 Pfam Plant invertase/pectin methylesterase inhibitor 92 229 IPR006501 GO:0004857
Gma15g01316 235 PANTHER PECTINESTERASE INHIBITOR-LIKE 78 234 - -
Gma15g01316 235 Gene3D Invertase/pectin methylesterase inhibitor family protein 89 234 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01316 Gma-Chr15 11687299 11688006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01316 85 203 Carbohydrate Esterase AT1G53830 25.758 2.02e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01316 - - gmx:100817067 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01316 15 11687299 11688006 Gma15g01316 15 11687299 11688006 ECH
Gma15g01316 15 11687299 11688006 Gma09g00325 09 3059772 3060305 GST