Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01299 ATGCTCCATGCATTGATGAGCCTTATCGCGCGCTGTTGGAAGCCGTTCGGGCACGGTGACGATGCCGGTAATGCCGCCGCCGGAAGAGAATGCAAGGACGGCCTCCTCTGGTTCCGCGACATCGGAAAGTTTGCAGCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAACCAGGTCATCGAGGACCAGAGCCAGATCGAGTCCGGCGCCTTCGGCACCTTCGTCGGCGTCTACGACGGCCACGGCGGCCCCGATTGCTCCCGCTACGTTTGCGATAACTTGTTCCGCAATCTCCAAGCGATATTGGCCGAGTCACAGAGTGTTGTGACATCTGAGGCCATTCATCAGGCGTTCCGGCGGACAGAGGAGGGGTTTACGGCGCTTGTTTCGGAGCTGTGGAGCTCTCGGCCGCAGATTGCGACTACTGGGACGTGTTGTTTGGTTGGGGTTATTTGTCGGCAGACACTCTTTGTGGCAAGTCTTGGAGATTCCCGTGCTGTGTTGGGTAGGAGAGTTGGCAACACCGGTGGGATGGCCGCGATTCAGTTGTCTACGGAGCACAATGCGAATTTTGAGGCTGTCAGGCAGGAGCTTAAGGAATTGCACCCGAATGACCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAGGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAACATGCGCAGTTTAACCGAGAACCCATTAATGCAAAATTCAGACTCCCCGAACCAATGAACATGCCTTTCTTGTCTGCTAATCCAACTATTCTTTCTCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGATCAAGCAGTGGATATTGTTCACAGCAGTCCATGCGCGGGTAGTGCGAAGAAACTTGTCAAGGCTGCCCTACAAGAAGCAGCAAGAAAACGTGAAATGCGATATTCAGACCTTTACAAGATTGACAAGAAGGTTCGTCGCCATTTTCACGACGATATAACTGTTATTGTTTTATTCTTAAACCACAACCTTATATCCAGGGGTGCAGTTCTAAATACACCACTTACAATTCGTAGTGCTCTCGATCACTGA 1119 0.5076 MLHALMSLIARCWKPFGHGDDAGNAAAGRECKDGLLWFRDIGKFAAGDFSMAVVQANQVIEDQSQIESGAFGTFVGVYDGHGGPDCSRYVCDNLFRNLQAILAESQSVVTSEAIHQAFRRTEEGFTALVSELWSSRPQIATTGTCCLVGVICRQTLFVASLGDSRAVLGRRVGNTGGMAAIQLSTEHNANFEAVRQELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINAKFRLPEPMNMPFLSANPTILSHPLQPNDSFLIFASDGLWEHLSNDQAVDIVHSSPCAGSAKKLVKAALQEAARKREMRYSDLYKIDKKVRRHFHDDITVIVLFLNHNLISRGAVLNTPLTIRSALDH 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01299 372 Pfam Protein phosphatase 2C 73 318 IPR001932 -
Gma15g01299 372 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Gma15g01299 372 SUPERFAMILY PP2C-like 57 350 IPR036457 -
Gma15g01299 372 PANTHER ALPHABET, ISOFORM E-RELATED 3 372 - -
Gma15g01299 372 CDD PP2Cc 49 349 IPR001932 -
Gma15g01299 372 Gene3D - 42 357 IPR036457 -
Gma15g01299 372 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 372 - -
Gma15g01299 372 SMART PP2C_4 42 347 IPR001932 -
Gma15g01299 372 ProSiteProfiles PPM-type phosphatase domain profile. 48 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01299 Gma-Chr15 11513334 11519374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01299 1 369 PP2C-type Phosphatase Gene Family AT4G38520 58.839 5.28e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01299 K01102 - gmx:100813333 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01299 15 11513334 11519374 Gma15g01299 15 11513334 11519374 ECH
Gma15g01299 15 11513334 11519374 Gma09g00312 09 2948916 2954509 GST
Gma17g00321 17 2561382 2566749 Gma15g01299 15 11513334 11519374 PCT
Gma15g01299 15 11513334 11519374 Gma17g00321 17 2561382 2566749 PCT