Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01296 ATGTCGTCATCTCTGATCGCGAATCCAACTGCGGATCGGTCGCGTGACTCTCACCGCACAAAGAAGAAGAAGAAATCCCTTAAGCAACACCAACTACAGCATGAGCAGAGCCACGCCAAATGGAAATCCCACGCGCAACAACAGCTATACTCCTCCAAGCTCCACCATGCTCTGGCGCGTGTCAACATCTCCGGCGACGCGCCGCGCCGCGGCAGGGCGGTGCGCGAGGCGGCCGACAGGGTTCTCGCCGTCGCCGCGAAGGGGAGAACGCGGTGGAGCCGCGCCATCCTGACTAACCGGCTCAAGCTGAAGTTCAGGAAGCCGATTCACAAGAGGCAGAAGGTTGTTGTTGGGCCGGGCCGGCCCAAGAAGGCCCGGTTCAGCGTTCTCCGGCTCAAGGGGAAAACCCTGCCCGCGGTCCAGAGGAAGGTTAGGGTTCTGGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCGCTTCCCGTGATTCTCGAAGAGGCCATCGATTACATACCCGCGCTCGAGATGCAGGTTCGCGCCATGCAAGCTCTCGCTGACTTACTCTTAGGCTCTTCCTCCGCCTCAACCTCCGCCGCCGCGCCGCCAAGTTGA 609 0.6092 MSSSLIANPTADRSRDSHRTKKKKKSLKQHQLQHEQSHAKWKSHAQQQLYSSKLHHALARVNISGDAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPIHKRQKVVVGPGRPKKARFSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSAAAPPS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01296 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 9 200 IPR044660 GO:0006355
Gma15g01296 202 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 9 200 - -
Gma15g01296 202 MobiDBLite consensus disorder prediction 1 45 - -
Gma15g01296 202 CDD bHLH_AtIBH1_like 129 184 IPR044549 GO:0006355
Gma15g01296 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 190 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01296 Gma-Chr15 11486036 11487263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01296 37 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 57.669 9.13e-52 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01296 - - gmx:100792237 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01296 15 11486036 11487263 Gma15g01296 15 11486036 11487263 ECH
Gma15g01296 15 11486036 11487263 Gma09g00309 09 2926308 2928086 GST
Gma17g00328 17 2607636 2608660 Gma15g01296 15 11486036 11487263 PCT
Gma15g01296 15 11486036 11487263 Gma17g00328 17 2607636 2608660 PCT