Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01257 ATGTGCAGCAGCATCTTTGGGCCAATAATCATGGACAATTACCAAGGTGACTTAACTGACATACTCCGAGCCAGTGGTGGAGCATATGGTAGCACAGGCACAGGCACAGGCACTTCATCATCTGATCAATTACCTACTACATCTCATCATCTTCATCATCATTCCTCTCACACCACCCTCTCTCATAATGATCACTGGCACCACCAACACTTCTCTTCTTCTTCTTCTTCTGATCCCATCACTTTCtcttcttcttcttcttcttcttcttcGGTGCTAATTCAAGACCCTATGAGAGGAGCCACAAACTTTGGTGATCCTTTCTCAATCATGAGAGATCCCTTCCTTCAGGTGCTTGACATGCCTTCTTCAGCTTCTGCCTACTTCACTGGTGGCTTGGAATTAGAAGCAGCTGCAACTTTTGGTGCTGCAGTCaatactaattctaatactgctactagttctactactaatactaatactactacCACTACTGTTTTTGCTGCTGCACACAAGATGCTTGTGGAACATGACAACAATAGCATGAGAAGGCCTTGTAAAAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAAGTTACCAGTCTCACCCTATGATTCCACCACCACAGCCATGGCACCTTCTCCAAGGCCAATTAAGCCTCCTGCTGTGGTTTCACCCAACATTATGCTGAATGCAAACACCTCCAAGGAGTGCCTTGTGGACACCACAGGAATGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCTAAAAAGGTTGTTTGTATTCCTGCACCAGCAGCTACAAACAGCAGACAGACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTACTACAGATGCAGCAGCTCTAAGGGTTGCTCTGCGAGGAAGCAAGTTGAGAGGAGCAGGAATGATCCAAACATGTTGGTTATCACATACACATCAGAGCACAACCATCCATGGCCAACTCAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAGCCATCCAAGAACAACAACAATGCTGCTTCCAATTCAAAGAATTCAGAAGGCTCAAACCCCCAAAAGGGCACAGCTACAAGAACAAAGGATGAAGAAGAGAGCAACAATAATAACAATAGTGAGGGAAATGTGTCCCCAGTTATGGCTGGGAACTCATCAAACAGTGTGAAGGAAGAGAATATGGAAGACATAGAGAGGCATCAGATTGAGATGGATGAGGGAGAGTTTAGTGATGGACTCCCTTATAAGCCTAGTTTGATGGATCAGAGTACTAATAACCAACAATCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCACTTGACCTTTTGTTCACACAGGGTTTTGGTGGTGCTGATGATCAAAGGGAATCCAAGTCCTTAGATCCATTTCATCTCTTTGACTGGTCAGGAGACAACAACACCAACACCAACACAAGTAGTTCATTTGAAGAACCTAATAATAAGAGAAGGTTATAA 1572 0.4256 MCSSIFGPIIMDNYQGDLTDILRASGGAYGSTGTGTGTSSSDQLPTTSHHLHHHSSHTTLSHNDHWHHQHFSSSSSSDPITFSSSSSSSSSVLIQDPMRGATNFGDPFSIMRDPFLQVLDMPSSASAYFTGGLELEAAATFGAAVNTNSNTATSSTTNTNTTTTTVFAAAHKMLVEHDNNSMRRPCKNIFSNMIQISPNAKLPVSPYDSTTTAMAPSPRPIKPPAVVSPNIMLNANTSKECLVDTTGMQISSPRNPGLKRRKNQAKKVVCIPAPAATNSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNAASNSKNSEGSNPQKGTATRTKDEEESNNNNNSEGNVSPVMAGNSSNSVKEENMEDIERHQIEMDEGEFSDGLPYKPSLMDQSTNNQQSEDFFAELGEIEADPLDLLFTQGFGGADDQRESKSLDPFHLFDWSGDNNTNTNTSSSFEEPNNKRRL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01257 523 Gene3D WRKY domain 261 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01257 523 MobiDBLite consensus disorder prediction 304 452 - -
Gma15g01257 523 MobiDBLite consensus disorder prediction 331 385 - -
Gma15g01257 523 MobiDBLite consensus disorder prediction 419 438 - -
Gma15g01257 523 MobiDBLite consensus disorder prediction 57 71 - -
Gma15g01257 523 ProSiteProfiles WRKY domain profile. 282 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01257 523 MobiDBLite consensus disorder prediction 32 46 - -
Gma15g01257 523 MobiDBLite consensus disorder prediction 494 523 - -
Gma15g01257 523 Pfam WRKY DNA -binding domain 289 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01257 523 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 503 IPR044810 GO:0003700
Gma15g01257 523 MobiDBLite consensus disorder prediction 500 516 - -
Gma15g01257 523 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 15 503 - -
Gma15g01257 523 MobiDBLite consensus disorder prediction 32 72 - -
Gma15g01257 523 SUPERFAMILY WRKY DNA-binding domain 285 348 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01257 523 SMART WRKY_cls 287 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01257 523 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01257 Gma-Chr15 11010486 11013635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01257 1 507 WRKY Transcription Factor Family AT1G30650 40.270 2.65e-87 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma15g01257 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01257 - - gsj:114386850 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01257 15 11010486 11013635 Gma09g00273 09 2499322 2503366 GST