Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01252 ATGGCAAATGGATGGAGCTCTAGGGAAAAATCTAGGTTATCAGTCAGAAGGGTGCATCAGGTCCCGAGACAGGATGAGAACTCCATGGCTATCACTCCTGTTGTTCCAAGTGACGAAGAGATTGTTGATGTTAAGCCTCTTCAAGTTTCTAGAGATATTGTGCATATTCCTGGTCCAAAGAGGTCTAATTTAAGTTTGGATAAGCTTATAATGGAAGCAATCACTAGCTTGAAGGAGAATGGTGGTTCTAATAAGACAGCTATTGCAGCTTTTATAGAGGACCAATATTGGGCACTGCCAGGCTTAAAAAGTATGTTGTCTGCAAAATTAAAGTTTTTGACAGCAAGTGGAAAACTGATCAAGGTAAATCGCAAGTATAGAATTGCACCTATAGCAGCATATTCTGACAGAAGAAGAAACTCATCCATGCTATATTTGAAAGGGAGGCAGAAAGCCTCTATGAAAATTGACAGGGATGAGACCAACATCCTTACTAGATCTCAGATAGATTTAGAGTTAGAAAAGATAAGGTCTATGACTCCACAAGAGGCAGCTGCATTTGCTGCCCGAGCAGTTGCTGAAGCAGAAGCCGCCATTGCAGAAGCAGAGGAGGCAGCAAAGGAGGCTGAGGCAGCAGAAGCTGATGCGGAGGCTGCACAAGCTTTTGCAGATGCTACAACGAAATCAGCGAAAGGGAGAAAATCCCCAAAGAGGATCCATACTTAA 726 0.4298 MANGWSSREKSRLSVRRVHQVPRQDENSMAITPVVPSDEEIVDVKPLQVSRDIVHIPGPKRSNLSLDKLIMEAITSLKENGGSNKTAIAAFIEDQYWALPGLKSMLSAKLKFLTASGKLIKVNRKYRIAPIAAYSDRRRNSSMLYLKGRQKASMKIDRDETNILTRSQIDLELEKIRSMTPQEAAAFAARAVAEAEAAIAEAEEAAKEAEAAEADAEAAQAFADATTKSAKGRKSPKRIHT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01252 241 Coils Coil 185 222 - -
Gma15g01252 241 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 62 130 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma15g01252 241 PANTHER TELOMERE REPEAT-BINDING FACTOR 1 1 237 - -
Gma15g01252 241 Pfam linker histone H1 and H5 family 65 123 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma15g01252 241 Gene3D - 59 139 IPR036388 -
Gma15g01252 241 PANTHER SINGLE MYB HISTONE 4 1 237 IPR044597 GO:0003691
Gma15g01252 241 SUPERFAMILY "Winged helix" DNA-binding domain 60 139 IPR036390 -
Gma15g01252 241 MobiDBLite consensus disorder prediction 204 241 - -
Gma15g01252 241 SMART h15plus2 60 125 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01252 Gma-Chr15 10933228 10938561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01252 1 233 Single Myb Histone (SMH) Gene Family AT1G49950 58.403 4.00e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01252 K09422 - gmx:100780698 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01252 15 10933228 10938561 Gma09g00267 09 2436669 2442449 GST