Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01244 ATGGGAGTCCTTTCTTCTCATAGAATACAACTATTATTATTTCCCATTGTTGTGTTGCTTTGGTCAGCTTCAGCTGCAAATTCAGCTAACAACACTTTTCTTCATTGCCTCGTGAACCATTCTGAGCCTTCTCACCCCATAACTTCAGCAATTTTCACACCAAACAACACCTCATTCTCTTCAGTATTGGAAGCCTACATTAGAAACCTTCGTTTCAACACCTCCACAACCCGTAAGCCATTCCTCATAATAACTGCACTTCATGTATCCCACATACAAGCATCCATTATTTGTGCTCAAAAACACAACTTGCAAATGAAAATCCGAAGTGGTGGCCATGACTATGAGGGTGTGTCTTACGTGGCAGAGGTTCCATTCTTCATCCTTGACATGTTCAATCTAAGAACCATTGAGGTTGACATAGGCACTGAAACCGCTTGGGTCCAAGCTGGTGCAACACTTGGTGAAGTTTATTATAGAATTGCTGAGAAGAGTAAAACCCATGCTTTCCCAGCAGGGGTTTGTCACACAGTTGGGGTGGGAGGACACATAAGTGGTGGTGGCTATGGCAACATGATGAGAAAATATGGTCTCTCAGTGGATAATGTTATTGATGCACAAATGGTTGATGTTCAAGGTAGATTGCTTGATAGAAAATCCATGGGTGAAGATCTCTTTTGGGCCATCACAGCTTCAGCTGCAAATTCAGCTCCCAACACTTTTGTTCAATGCCTTCTAAACAACTCAGAGCCCTCTTACCCCATAACATCAGCAATTTTCACACCAAACAACTCCTTATTCTCTTCAGTCTTGGAAGCCTACATCAGAAACCTTCGTTTCAACACCTCCACAACCCGGAAGCCATTCCTTATAGTGACCCCTTCTCATGTTTCCCATGTGCAAGCAGCCATTGTTTGTGCAAAAAAGCACAAATTGCTGATGAAAATCCGAAGTGGTGGCCATGACTACGAAGGGTTGTCTTATGTGGCTTCACAGCCACTCTTCATCCTTGACATGTTCAATCTTCGATCCATTGAGATTGACATGAAAACCGAGACAGCGTGGGTCGAAGCCGGTGCAACGCTTGGTGAAGTTTATTACAGAATTGCTGAGAAGAGTAAAATTCATGCTTTCCCAGCAGGGGTTTGTCCCACTGTTGGGGTAGGAGGACACATAAGTGGTGGTGGCTATGGCAACATGATGAGAAAATATGGTCTCTCAGTGGATAATGTTATTGATGCACTAATGGTTGATGTTCAAGGTAGATTACTTGATAGAAAATCAATGGGTGAAGATCTCTTTTGGGCCATCACAGGTGGTGGTGGAGCTAGTTTTGGTGTGGTTCTTGCCTACAAAATAAAACTAGTTCGAGTTCCCGAAACAGTCACTGTTTTCCGGGTTCCGAAAACGCTGGAGCAAAATGCCACTGACATAGTTTATAATTGGCAGCATGTTGCACCAACCATCAACAACAACCTTTTCATTAGACTTGTCTTGAACGTTGTGAACGTTACACAAAATGAAACAAAGACTATAAGAGCAACCTTCGTAGCTCTATTCCTTGGTGACTCCAAAAGCCTTGTTTCTCTCTTGAATGACAAGTTCCCTCAATTGGGTTTGAAGCAATCCGATTGCATCGAAACAAGCTGGCTTGGTTCAGTGCTGTTTTGGACAAACATCAACATCACAGCTCCGGTTGAGGTTTTGCTTAATAGACAACCACAATCAGTCAACTACTTGAAAAGGAAATCTGATTATGTTAAGAAATCAATTTCCAAAGAGGGACTAAAAAGAAATGGGAAGAGCTGCAGATTGAGATGGGTGAATTACCTGAGGCCAGACCTCGAGAAGGGTCAAATAACACCACAAGAAGAAAGCATAATTCTAGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACAATTGCAAGAAGCTTGCCAGGAAGAACTGACAATGAGATAAAGAATTATTGCAGGACTCACTTCAAGAAAAAGATAAGGGCTCACTTCAGCTAA 2016 0.4266 MGVLSSHRIQLLLFPIVVLLWSASAANSANNTFLHCLVNHSEPSHPITSAIFTPNNTSFSSVLEAYIRNLRFNTSTTRKPFLIITALHVSHIQASIICAQKHNLQMKIRSGGHDYEGVSYVAEVPFFILDMFNLRTIEVDIGTETAWVQAGATLGEVYYRIAEKSKTHAFPAGVCHTVGVGGHISGGGYGNMMRKYGLSVDNVIDAQMVDVQGRLLDRKSMGEDLFWAITASAANSAPNTFVQCLLNNSEPSYPITSAIFTPNNSLFSSVLEAYIRNLRFNTSTTRKPFLIVTPSHVSHVQAAIVCAKKHKLLMKIRSGGHDYEGLSYVASQPLFILDMFNLRSIEIDMKTETAWVEAGATLGEVYYRIAEKSKIHAFPAGVCPTVGVGGHISGGGYGNMMRKYGLSVDNVIDALMVDVQGRLLDRKSMGEDLFWAITGGGGASFGVVLAYKIKLVRVPETVTVFRVPKTLEQNATDIVYNWQHVAPTINNNLFIRLVLNVVNVTQNETKTIRATFVALFLGDSKSLVSLLNDKFPQLGLKQSDCIETSWLGSVLFWTNINITAPVEVLLNRQPQSVNYLKRKSDYVKKSISKEGLKRNGKSCRLRWVNYLRPDLEKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYCRTHFKKKIRAHFS 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01244 671 Gene3D - 139 230 IPR016169 -
Gma15g01244 671 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 612 666 IPR017930 -
Gma15g01244 671 ProSiteProfiles PCMH-type FAD-binding domain profile. 76 266 IPR016166 GO:0071949
Gma15g01244 671 CDD SANT 621 662 IPR001005 -
Gma15g01244 671 PANTHER OS08G0158400 PROTEIN 236 597 - -
Gma15g01244 671 Gene3D - 461 598 - -
Gma15g01244 671 SUPERFAMILY FAD-binding/transporter-associated domain-like 243 459 IPR036318 GO:0050660
Gma15g01244 671 SUPERFAMILY FAD-binding/transporter-associated domain-like 29 231 IPR036318 GO:0050660
Gma15g01244 671 Pfam Myb-like DNA-binding domain 617 661 IPR001005 -
Gma15g01244 671 Gene3D - 347 575 IPR016169 -
Gma15g01244 671 SMART sant 616 664 IPR001005 -
Gma15g01244 671 Gene3D - 27 134 IPR016167 -
Gma15g01244 671 Gene3D - 237 342 IPR016167 -
Gma15g01244 671 PANTHER BERBERINE BRIDGE ENZYME-LIKE 8 236 597 - -
Gma15g01244 671 PANTHER BERBERINE BRIDGE ENZYME-LIKE 8 24 236 - -
Gma15g01244 671 Pfam FAD binding domain 290 424 IPR006094 GO:0050660
Gma15g01244 671 Pfam FAD binding domain 83 216 IPR006094 GO:0050660
Gma15g01244 671 PANTHER OS08G0158400 PROTEIN 24 236 - -
Gma15g01244 671 Gene3D - 621 670 - -
Gma15g01244 671 ProSiteProfiles PCMH-type FAD-binding domain profile. 284 458 IPR016166 GO:0071949
Gma15g01244 671 SUPERFAMILY Homeodomain-like 594 667 IPR009057 -
Gma15g01244 671 ProSiteProfiles Myb-like domain profile. 612 662 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01244 Gma-Chr15 10858305 10868457 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01244 234 596 Miscellaneous Gene Families AT1G01980 56.764 1.27e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma15g01244 FAD_binding_4 5.6e-27 CL0077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01244 - - gmx:100802131 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01244 15 10858305 10868457 Gma15g01244 15 10858305 10868457 ECH
Gma15g01244 15 10858305 10868457 Gma09g00256 09 2351778 2359763 GST