Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01197 ATGGAGGATTCCGAGGGAGTCCTCAGCTTCGATTTCGAGGGCGGCCTCGACGCCGCTCCCTCCTCCGCCGCCGCCGCCGTTCCCTCCGGCCCCCTCGTCCAGCACGACTCCTCCGCGGCAGCTTCCGCCGTGTCCAACGGAGGCCACGCCGCCCCCGCCCCGTCCACGGCGGACCCCGCCGGCGGCAACGTCCCGGGGCGGCGGAGCTTCCGGCAGACGGTTTGCCGGCACTGGCTGCGCAGCCTGTGCATGAAGGGCGACGCGTGCGGGTTCCTGCACCAGTACGACAAGGCGAGGATGCCGGTGTGCCGCTTCTTCAGGCTCTACGGAGAGTGCCGAGAACAGGATTGCGTCTATAAACACACCAATGAAGACATCAAGGAGTGTAACATGTACAAGTTGGGATTTTGTCCTAATGGACCTGATTGTCGATATAGGCATGCAAAATCTCCTGGACCTCCACCTCCTGTTGAAGAGGTTCTTCAAAAGATCCAACATTTATTTTCCTACAATTATAACTCATCCAACAAATTTTTCCAACAAAGAGGTGCTAGTTATAATCAACAAGCTGAAAAACCCCAGCTTCCTCAAGGAACTAATTCTACAAACCAAGGGGTGACTGGAAAACCATTACCAGCAGAGTCGGGAAATGCCCAGCCACAGCAACAAGTTCAGCAGTCCCAGCAGCAGGTTAACCAGAGCCAAATGCAAAATGTTGCTAATGGCCAGCCTAATCAAGCAAATAGAACTGCAACCCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTTAAAAGTTGCAATCGTGAAAATTTGGAGTTATCTGTACAACAAGGAGTTTGGGCAACTCAAAGGAGCAATGAATCCAAACTAAATGAAGCATTTGACTCTGTGGAAAATGTGATATTAGTTTTCTCAGTCAACCGTACTAGACATTTCCAGGGTTGTGCAAAGATGACATCCAGAATTGGTGGTTCTGTTGCTGGGGGGAATTGGAAATATGCTCATGGAACTGCACATTATGGACGAAATTTCTCTGTTAAATGGTTGAAGTTATGTGAACTGTCATTCCACAAAACTCGCCATTTAAGGAATCCATACAATGAGAACTTACCAGTGAAGATAAGTAGAGATTGTCAGGAGCTGGAGCCCTCTATTGGAGAGCAGCTGGCATCCTTGCTTTATCTTGAGCCAGATAGTGAACTTATGGCTATCTCGGTTGCAGCCGAATCTAAACGGGAAGAAGAGAAAGCCAAGGGAGTGAATCCAGATAATGGAGGAGAAAATCCAGATATTGTACCATTTGAAGACAATGAAGAAGAGGAAGAAGAAGAGAGTGATGAAGAGGAGGAGAGCTTCAGTCATGGTGTAGGGCCAGCTGGCCAAGGCAGAGGTAGGGGAAGAGGTATGATGTGGCCGCCTCATATGCCTCTTGGGCGTGGAGCCCGACCCATGCCTGGAATGCAGGGCTTTAACCCTGTAATGATGGGTGATGGGTTATCGTATGGGCCTGTTGGTCCTGTTGGACCTGATGGCTTTGGTATGCCAGATCTTTTCGGTGTGGGACCCCGTGGTTTTGCTCCATATGGTCCTAGGTTCTCTGGTGATTTTGGAGGTCCCCCAGCAGCCATGATGTTTCGTGGGCGACCATCTCAACCTGGGATGTTTCCAAGTGGTGGGTTTGGGATGATGATGAATCCTGGACGTGGTCCTTTCATGGGTGGGATGGGGGTTGGAGGTGCAAATCCACCAAGAGGTGGTAGGCCAGTTAATATGCCTCCAATGTTTCCACCACCTCCACCGCTACCACAGAACGCAAACCGTGCTGCCAAAAGAGATCAAAGAACTGCTGATCGGAATGATAGGTTTGGTTCAGGATCCGAGCAGGGTAAGAGTCAAGACATGCTCAGTCAAAGTGGCGGACCTGATGATGACGCACAGTATCAACAAGGATACAAAGGGAACCAAGATGATCATCCTGCTGTGAACAACTTCAGGAATGATGATAGTGAAATTCCATTAGGAAGAAGGGATAGCTTAACAGCAAACCGAACTCTTGCAAATCAAAATCTTCCAGCACCCTTCTTCACATTGGATAAACTCAAAGCTGCCTTTGCTGTTCAAGGTCTCAACACCCTTGATTTAGTTACACTCTCAGGTGGTCATACGTTTGGAAGAGCTCGTTGCAGTACATTCATTAACCGATTATACAACTTCAACAACACTGGAAACCCTGGTCCAACTCTGAACACAACTTACTTAGAACTATTGCGTGCGAGATGCCCCCAGAATGCAACTGAGAATAACCTCACCAGTTTGGACCTGACCACACCTGATCAATTTGACAACAGATACTACTCCAATCTTCAGCAGCTAAATGGCTTGCTTCAGAGTGACCAAGAACTTTTCTCCACTCCTGGTGCTGATACTATTCCCATTGTCAACAGCTTCATCAGTAACCAGAATACTTTCTTTGCCAACTTTAGAGTTTCAATGATAAAAATGGGTAATATTGGAGTTCTGACTGGGGATGAAGGAGAAATTCGCTCGCAATGTAATTTTGTGAATTACTGA 2574 0.4817 MEDSEGVLSFDFEGGLDAAPSSAAAAVPSGPLVQHDSSAAASAVSNGGHAAPAPSTADPAGGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNSSNKFFQQRGASYNQQAEKPQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQSQQQVNQSQMQNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFSHGVGPAGQGRGRGRGMMWPPHMPLGRGARPMPGMQGFNPVMMGDGLSYGPVGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGDFGGPPAAMMFRGRPSQPGMFPSGGFGMMMNPGRGPFMGGMGVGGANPPRGGRPVNMPPMFPPPPPLPQNANRAAKRDQRTADRNDRFGSGSEQGKSQDMLSQSGGPDDDAQYQQGYKGNQDDHPAVNNFRNDDSEIPLGRRDSLTANRTLANQNLPAPFFTLDKLKAAFAVQGLNTLDLVTLSGGHTFGRARCSTFINRLYNFNNTGNPGPTLNTTYLELLRARCPQNATENNLTSLDLTTPDQFDNRYYSNLQQLNGLLQSDQELFSTPGADTIPIVNSFISNQNTFFANFRVSMIKMGNIGVLTGDEGEIRSQCNFVNY 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01197 857 PRINTS Plant peroxidase signature 788 805 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 PRINTS Plant peroxidase signature 713 725 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 PRINTS Plant peroxidase signature 666 681 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 PRINTS Plant peroxidase signature 830 843 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 PRINTS Plant peroxidase signature 772 787 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 Gene3D Peroxidase, domain 2 692 835 - -
Gma15g01197 857 ProSiteProfiles Plant heme peroxidase family profile. 632 856 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 ProSiteProfiles Zinc finger C3H1-type profile. 69 96 IPR000571 GO:0046872
Gma15g01197 857 MobiDBLite consensus disorder prediction 37 66 - -
Gma15g01197 857 SMART c3hfinal6 125 149 IPR000571 GO:0046872
Gma15g01197 857 SMART c3hfinal6 69 95 IPR000571 GO:0046872
Gma15g01197 857 SMART c3hfinal6 97 123 IPR000571 GO:0046872
Gma15g01197 857 Gene3D - 668 856 - -
Gma15g01197 857 Gene3D - 65 127 - -
Gma15g01197 857 Pfam YT521-B-like domain 259 393 IPR007275 GO:0003723
Gma15g01197 857 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 1 671 - -
Gma15g01197 857 MobiDBLite consensus disorder prediction 183 253 - -
Gma15g01197 857 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 671 IPR045168 -
Gma15g01197 857 Pfam Peroxidase 671 818 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 ProSiteProfiles Zinc finger C3H1-type profile. 123 150 IPR000571 GO:0046872
Gma15g01197 857 SUPERFAMILY CCCH zinc finger 69 100 IPR036855 GO:0046872
Gma15g01197 857 MobiDBLite consensus disorder prediction 611 625 - -
Gma15g01197 857 MobiDBLite consensus disorder prediction 433 451 - -
Gma15g01197 857 ProSitePatterns Peroxidases proximal heme-ligand signature. 714 724 IPR019793 -
Gma15g01197 857 MobiDBLite consensus disorder prediction 626 661 - -
Gma15g01197 857 MobiDBLite consensus disorder prediction 587 605 - -
Gma15g01197 857 MobiDBLite consensus disorder prediction 409 472 - -
Gma15g01197 857 PRINTS Haem peroxidase superfamily signature 666 678 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 PRINTS Haem peroxidase superfamily signature 774 789 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 PRINTS Haem peroxidase superfamily signature 714 729 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma15g01197 857 MobiDBLite consensus disorder prediction 574 675 - -
Gma15g01197 857 Gene3D ph1033 like domains 237 397 - -
Gma15g01197 857 ProSiteProfiles YTH domain profile. 259 394 IPR007275 GO:0003723
Gma15g01197 857 SUPERFAMILY Heme-dependent peroxidases 669 856 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01197 Gma-Chr15 10327922 10339865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01197 672 856 Peroxidase AT5G06730 60.541 2.37e-67 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma15g01197 peroxidase 1.9e-33 CL0617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01197 K14404 - gmx:100802826 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01197 15 10327922 10339865 Gma15g01197 15 10327922 10339865 ECH
Gma15g01197 15 10327922 10339865 Gma09g00210 09 1809910 1819489 GST