Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01190 ATGAAGGAAGGTGGTGGTAGAAAGCAAGGTGCAGCCTCACCTTGTGCTGCATGCAAGCTTCTGAGGAGAAGGTGTGCTCAGGATTGTGTTTTTGCTCCATATTTCCCAGCAGATGAACCCCAAAAGTTTGCAAACGTGCACAAGGTGTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACCTACCAATGCATCAACGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCCAATGCCAGAGTCCGAGACCCTGTTTACGGGTGCGTTGGGGCCATCTCTTCACTTCAGCAACAGATTGATGTGCTACAGACGCAATTGGCCCTGGCCCAGGCTGAGGTGGCCCATCTTCGGGCGAGACAAAACAGATGCTTTTCCCATCATGGGCTTAGGCCAACTAGCCCAACCACTAGTGGTTTTCCATCATCCAAGACCTTGGACTCACATGCTAAGCCTATTTTTGACATAGACATGGTGGACCAGTTAGTATATCTATTAGTGGAGCATAGGAAGAAAAAAAAAAAGCAATTTGGCCTACACTTCCACTTGGTGAGTGTTGGAGCGGTGCTGCCGGCAGTGGCCGGGGTACTGTG 593 0.5008 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVAHLRARQNRCFSHHGLRPTSPTTSGFPSSKTLDSHAKPIFDIDMVDQLVYLLVEHRKKKKKQFGLHFHLVSVGAVLPAVAGVL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01190 197 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Gma15g01190 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 154 - -
Gma15g01190 197 Coils Coil 93 120 - -
Gma15g01190 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 154 - -
Gma15g01190 197 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01190 Gma-Chr15 10265609 10270238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01190 1 130 AS2 family AT1G31320 88.462 3.09e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma15g01190 LOB 2.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01190 - - gmx:100786743 323.553