Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01182 ATGGCTTATTCAGCCGAACCCTCATCATCTTTGAGCTTTACCTCATCTTCCCATCTATCAAATGGGTCGGTTAGTCACAACATATGCTCTTCTTATGGCTCTGACCCTGGACCTAACCTTGAGGCTCTCAGTTTGAGTAAGCTTAGCTCCAATTTTGAGCAGCTTTTGATTGAAACTGATTGTGATTATAGTGATGCTGACATCGTTGTGGAGGGAATTTCGGTTAGTGTTCATCGATGTATTCTGGCCTCTAGGAGTAAGTTTTTCCATGAATTATTCAAGAGAGAGAAGGGTTCATCAGAAAAAGAAGGGAAATTGAAGTATAACATGAGTGATTTGTTGCCTTATGGCAAGGTTGGATATGAAGCCTTCCTCATATTCCTTGGCTATGTATATACTGGTAAACTCAAGCCCTCTCCAATGGAAGTGTCTACTTGTGTTGACAGTGTGTGTGCCCATGATGCTTGTAGACCTGCCATTAACTTTGCTGTGGAGTTGATGTATGCCTCTTACATTTTTCAAATACCAGAGTTTGTATCACTTTTCCAGAGACGTCTACTTAACTTTATAGGGAAGGCTCTTGTGGAAGATGTCATCCCAATCCTCACTGTTGCTTTCCATTGTCAATTGAGTCAACTTGTCAATCAATGCATTGATAGGGTGGCCAGATCAGACCTTGACCAGATTTCAATTGACCAAGAGCTTCCAAATGAACTCTCACAAAAAGTTAAATTGCTCCGCCGCAACCCTCAGCGAGATGTTGAAAACGATGCTTCTATAGTGGATGCTTTGTCTCTAAAAAGAATCACTAGAATACACAAGGCATTGGATTCAGATGATGTTGAGCTTGTTAAACTTCTTTTAAATGAATCAGACATTACTTTAGATGAAGCCAATGCTCTCCATTATGCTGCAGCCTACTGTGATCCCAAGGTTGTTTCTGAGGTACTTGGTTTGGGACTCGCTAATGTCAATCTTCGAAATTCTAGGGGGTACACAGTGCTTCACATTGCTGCCATGCGTAAAGAGCCTTCCATTATAGTATCCCTACTTACGAAAGGGGCTTGTGCATCAGATTTGACTTTTGATGGTCAGAGTGCTGTTAGTATTTGTAGGAGGTTGACAAGGCCAAAGGATTATCATGCAAAAACAGAGCAGGGGAAAGAAACAAACAAAGATCGGATATGCATCGATGTTCTTGAAAGAGAAATGTGGAGGAATCCATTGGCTGGGGATGCCTGTATGTCTTCCCATACCATGGCTGATGATCTCCACATGAAACTACTATACCTTGAGAACAGAGTGGCATTTGCAAGACTTTTCTTCCCTTCAGAAGCCAAACTAGCCATGGACATTGCACATGCTGAGACAACATCTGAGTTTGCTGGTCTTTCTGCATCAAACTCAAAAGGTTCAAATGGAAACTTAAGGGAGGTTGATCTCAATGAAACTCCTATAGTTCAAAGTAAAAGACTTTTTTCTAGAATGGAAGCCCTTATGAAAACAGTGGAGATGGGGCGGCGCTACTTCCCGCATTGCTCGGAAGTGTTGGATAAGTTCATGGAGGATGACTTGCCTGACTTGTTTTACCTTGAAAAGGGTACTAATGAAGAGCAGAGAATCAAAAGGACACGTTTCATGGAGCTTAAAGATGACGTCCACAAGGCTTTCAACATGGACAAGGCCGAGTTTAGCCGCTCTGGGATTTCATCTTCATCATCCTCATCATCCCTCAGAGATTCTGTTGTACATTACAAGGCTAGGAAAGTGTAA 1773 0.4202 MAYSAEPSSSLSFTSSSHLSNGSVSHNICSSYGSDPGPNLEALSLSKLSSNFEQLLIETDCDYSDADIVVEGISVSVHRCILASRSKFFHELFKREKGSSEKEGKLKYNMSDLLPYGKVGYEAFLIFLGYVYTGKLKPSPMEVSTCVDSVCAHDACRPAINFAVELMYASYIFQIPEFVSLFQRRLLNFIGKALVEDVIPILTVAFHCQLSQLVNQCIDRVARSDLDQISIDQELPNELSQKVKLLRRNPQRDVENDASIVDALSLKRITRIHKALDSDDVELVKLLLNESDITLDEANALHYAAAYCDPKVVSEVLGLGLANVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHAKTEQGKETNKDRICIDVLEREMWRNPLAGDACMSSHTMADDLHMKLLYLENRVAFARLFFPSEAKLAMDIAHAETTSEFAGLSASNSKGSNGNLREVDLNETPIVQSKRLFSRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTNEEQRIKRTRFMELKDDVHKAFNMDKAEFSRSGISSSSSSSSLRDSVVHYKARKV 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01182 590 PANTHER REGULATORY PROTEIN NPR3 10 577 IPR044292 GO:0009862|GO:2000022|GO:2000031
Gma15g01182 590 PANTHER REGULATORY PROTEIN NPR3 10 577 - -
Gma15g01182 590 ProSiteProfiles Ankyrin repeat profile. 330 355 IPR002110 GO:0005515
Gma15g01182 590 ProSiteProfiles BTB domain profile. 64 140 IPR000210 GO:0005515
Gma15g01182 590 Pfam Ankyrin repeats (3 copies) 273 355 IPR002110 GO:0005515
Gma15g01182 590 ProSiteProfiles Ankyrin repeat region circular profile. 330 355 - -
Gma15g01182 590 CDD BTB_POZ_NPR_plant 47 190 - -
Gma15g01182 590 Pfam BTB/POZ domain 62 143 IPR000210 GO:0005515
Gma15g01182 590 SUPERFAMILY POZ domain 60 189 IPR011333 -
Gma15g01182 590 SMART ANK_2a 296 326 IPR002110 GO:0005515
Gma15g01182 590 SMART ANK_2a 330 362 IPR002110 GO:0005515
Gma15g01182 590 SMART ANK_2a 267 295 IPR002110 GO:0005515
Gma15g01182 590 SMART BTB_4 64 190 IPR000210 GO:0005515
Gma15g01182 590 Gene3D Potassium Channel Kv1.1; Chain A 39 222 IPR011333 -
Gma15g01182 590 Gene3D - 264 404 IPR036770 -
Gma15g01182 590 Pfam NPR1/NIM1 like defence protein C terminal 372 576 IPR021094 -
Gma15g01182 590 SUPERFAMILY Ankyrin repeat 261 373 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01182 Gma-Chr15 10173540 10178654 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma15g01182 NPR1_like_C 5.1e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01182 K14508 - gmx:100217339 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01182 15 10173540 10178654 Gma15g01182 15 10173540 10178654 ECH
Gma15g01182 15 10173540 10178654 Gma09g00195 09 1677126 1682570 GST