Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01169 ATGGAAGAGTCCTCTCTCTGCTGCGAACAATTGCCGGATGGGGAATGCATTGAGGTTCAGAAAGACGAAGAAGACGATGGACTGATTGAATTGGACTGTCAAAATGGTTTTCCTGAAGGAAGAAAGGAATTTGTTGCACCTGCTGTTGGAATGGAGTTTGAGTCATATGATGATGCTTACAATTATTATATTTGTTATGCCAAGGAGGTGGGGTTTCGCGTGAGGGTGAAGAATTCGTGGTTCAAGCGGAATAGCCGAGAGAAATATGGTGCGGTGCTTTGCTGTAGCAGCCAGGGTTTCAAGAGAATAAAGGACGTTAATCATTTGAGGAAAGAGACGAGAACTGGTTGTCCTGCTATGATAAGGATGAGGTTGGTGGAGTCTCAGAGATGGAGGGTGCTTGAGGTTATGCTTGAACATAACCACATGTTAGGTGCTAAGATACTCAGGTCGGTTAAGAAGATGGGAAATGGAACAAAGAGGAAGCCATTGCCTAGTTCTGATGCTGAGGGTCAGACGATTAAGTTATATCGTGCACTTctcgccctgCTCTCCAGAATGTACACAAGAGAAATGTTCATGAAATTCCAGTTAGAAGTGGAAGAAGTGTATTCTTGTTTTGGTACAACACAATTGCATGTGGATGGCCCCATCATAATTTTCTTGGTCAAGGAACGTGTTTTGATTGAAGGAAACAGACGGGAGATTAGGGATTTCGAAGTTTTGTACAGTAGAACAGCAGGTGAAGTTCGTTGCATCTGTAGTTGCTTTAATTTTTATGGATATCTATGTCGGCATGCACTGTGTGTTCTCAATTTTAATGGGGTTGAAGAGATACCTCACAAATACATTCTTTCACGATGGAAGAAAGATTTCAAACGTCTTTATGTTCCTGATCACAGCTCTGGTGGTGTTAATGATACTGACCGCATTCAATGGTCTAATCAGTTATTTAGAAGTGCTTTACAAGTTGTAGAGGAGGGGATACTTTCCCTAGACCATTACAATGTAGCGTTACAATCTTTAGAAGAATCACTGAGTAAGGTTCATGATGTAGAACAGAGGCAGGATGTTCGGTTTTCGTTTCACCGTATCTCTGAACATTTTTTACTAACTCTGAACTGA 1125 0.4107 MEESSLCCEQLPDGECIEVQKDEEDDGLIELDCQNGFPEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVNHLRKETRTGCPAMIRMRLVESQRWRVLEVMLEHNHMLGAKILRSVKKMGNGTKRKPLPSSDAEGQTIKLYRALLALLSRMYTREMFMKFQLEVEEVYSCFGTTQLHVDGPIIIFLVKERVLIEGNRREIRDFEVLYSRTAGEVRCICSCFNFYGYLCRHALCVLNFNGVEEIPHKYILSRWKKDFKRLYVPDHSSGGVNDTDRIQWSNQLFRSALQVVEEGILSLDHYNVALQSLEESLSKVHDVEQRQDVRFSFHRISEHFLLTLN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01169 374 ProSiteProfiles Zinc finger SWIM-type profile. 239 275 IPR007527 GO:0008270
Gma15g01169 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 184 353 - -
Gma15g01169 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 184 353 IPR031052 GO:0006355
Gma15g01169 374 Pfam SWIM zinc finger 227 271 IPR007527 GO:0008270
Gma15g01169 374 Pfam FAR1 DNA-binding domain 61 144 IPR004330 -
Gma15g01169 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 23 175 IPR031052 GO:0006355
Gma15g01169 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 23 175 - -
Gma15g01169 374 SMART 26again6 250 277 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01169 Gma-Chr15 10029706 10034454 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma15g01169 FAR1 9.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01169 - K17604 gmx:100796448 375.17