Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01130 ATGATGTCAGTGGAAACGGGGCATGATTGTTTGCACTATGATTCCGATGAAGAAACCTCTAGTTGCTCTTGCGGTTTCATTGGATTTCGGAGAAACCAAGTGTTTGATTGCAGCACCAACGAGATAAACAATGAAGATTCAGAGGAGCTATTTGAGATCAATCTGAAGGAGCAATTGGATACAATATCAGAAGAAGACTGCGAAAGCAGTGTGTTCTCTTTTGATTTTCATAACGACAAAGATGTTGTTCATGTTGCAGTGGACCACGTTGGGGAATCAAGCATGGAAGCACTTTTATGGACTTTGAATCATGCTGTCACACCCTCTACCACTGTCTATCTCGTACACGTTTTCCCTGAAATCAGGCTCGTCCCAAGTCCATTTGGGAAATTTCCAAGGAGTCATGTAAATCCAGAATATGTTAACTTTCACTTGACACAACAGAAAAGCAAGACAAAAGAACTCCTTCAAAAGTTCATCGACTTGTGCCTTGATTCAAAGGTTAAGGTGGAGATTATGCTTATTGAGGGTGACAACATTGCCAAAGCTATAACAGACCATGTTAGAGTTCATAGTATAAGGAAATTGGTGATTGGAATTACCAAATCTAATTTAAGCAAATCCGTCTCTAGAAGGCGAAATGCCATAGCAAACAAGGTCCTCAAGAACGTACCAGAAATTTGTGATATTAAAATAATATGCGATGGAAAAGAAGTGATTGATCAGATGATAGGTTGCAACTCATCATGTTCCAGTGACAGTAGAAGTTCCAGAGTTTCACAAGAAGAAAATGAATCCTGTGGTTTTGTTCCTCTTATGCGTTTTGTGCCAAATCCTATATGGTTATTTAGACCAAGATTTTGA 864 0.3912 MMSVETGHDCLHYDSDEETSSCSCGFIGFRRNQVFDCSTNEINNEDSEELFEINLKEQLDTISEEDCESSVFSFDFHNDKDVVHVAVDHVGESSMEALLWTLNHAVTPSTTVYLVHVFPEIRLVPSPFGKFPRSHVNPEYVNFHLTQQKSKTKELLQKFIDLCLDSKVKVEIMLIEGDNIAKAITDHVRVHSIRKLVIGITKSNLSKSVSRRRNAIANKVLKNVPEICDIKIICDGKEVIDQMIGCNSSCSSDSRSSRVSQEENESCGFVPLMRFVPNPIWLFRPRF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01130 287 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 8 284 - -
Gma15g01130 287 Pfam Universal stress protein family 83 224 IPR006016 -
Gma15g01130 287 CDD STK_N 91 236 - -
Gma15g01130 287 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 8 284 - -
Gma15g01130 287 Gene3D HUPs 77 208 IPR014729 -
Gma15g01130 287 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 90 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01130 Gma-Chr15 9647296 9649413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01130 100 237 U-box Gene Family AT4G25160 30.000 3.35e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01130 - - gmx:100818837 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01130 15 9647296 9649413 Gma09g00144 09 1188186 1193397 GST
Gma17g00045 17 478904 480578 Gma15g01130 15 9647296 9649413 PCT