Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01120 ATGATTAGTTCAAGCAGCAGCTATAAACCACCACCGCCATCACCTTCTGATATCCCTGTCCATGTCACACCACCACCACCACCACCACCCCCACCTCGTTGTCCCAATCTGCGTATATGCCCCCTCCTCTCTGGTCTAACTGACCTTGAGGCTGCTGTGTGTGTCTGCGCTCAAATCAGGGCCGAGCTCCTTGGAATCCCCATTAACATAAACCTTTTCTTGGACCTAGTGTTAAACAGATGCGTCACCTTCACCACCGCTAAAGCCCGCTCTTCCGGGACGAAGCAATCAAGACCTTCATATCTGAAGTCCTCTTGCTCGTCGCTTTATGATATTCTTGATATTCCCGCCGACACCTCTAACCAAGAAATCAAGGCCATATACTGGCGACTGGCCAAAGTCTACCACCCCGACGTGGCGGCCATCAACCAAAAAAACTTGTCCGCTGACGAATTCATGGAGATTCTCGTCGCGTACTCTACTCTTTCCGATCCTGACAAACACATTAAATACAATCAGAGCCTATTCTGGCGACAACGGTCATAG 546 0.5 MISSSSSYKPPPPSPSDIPVHVTPPPPPPPPPRCPNLRICPLLSGLTDLEAAVCVCAQIRAELLGIPININLFLDLVLNRCVTFTTAKARSSGTKQSRPSYLKSSCSSLYDILDIPADTSNQEIKAIYWRLAKVYHPDVAAINQKNLSADEFMEILVAYSTLSDPDKHIKYNQSLFWRQRS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01120 181 MobiDBLite consensus disorder prediction 8 29 - -
Gma15g01120 181 CDD DnaJ 110 164 IPR001623 -
Gma15g01120 181 Pfam DnaJ domain 109 172 IPR001623 -
Gma15g01120 181 Pfam Hydrophobic seed protein 38 82 IPR027923 -
Gma15g01120 181 PRINTS DnaJ domain signature 147 167 IPR001623 -
Gma15g01120 181 PRINTS DnaJ domain signature 110 128 IPR001623 -
Gma15g01120 181 PRINTS DnaJ domain signature 128 143 IPR001623 -
Gma15g01120 181 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 37 83 IPR036312 -
Gma15g01120 181 Gene3D - 23 92 IPR036312 -
Gma15g01120 181 ProSiteProfiles dnaJ domain profile. 108 175 IPR001623 -
Gma15g01120 181 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 86 180 - -
Gma15g01120 181 SUPERFAMILY Chaperone J-domain 102 175 IPR036869 -
Gma15g01120 181 Gene3D DnaJ domain 96 181 IPR036869 -
Gma15g01120 181 SMART dnaj_3 107 167 IPR001623 -
Gma15g01120 181 PANTHER - 86 180 - -
Gma15g01120 181 CDD HPS_like 40 81 IPR027923 -
Gma15g01120 181 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01120 Gma-Chr15 9495086 9497441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01120 110 172 C2H2 Transcription Factor Family AT1G74250 35.821 5.87e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01120 - - gmx:100807111 141.739