Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01118 ATGGACCTCTTCACCGGCGACCACTTCCCCGTCCCCGACCACGTCGCTCCGTTCCCCGATTCCGGCGACCTCCTCTTCGCCGCCGACCTCCTCTCCCACCGCCACAACCCCCAGAAGCTCCGCCCCATCAGCTTGTCTTTTGATGCTGAGGATGAAGATGAGGATGATGACAATTCATCAGCAAGTACCAAAGGACATGGCCCTAGAAAGAAAAGGAGAAAGATGGTGAGAAAGCTCGAAGATTTTGCGAAGGATTTGGTGGTGAAGGTGATGGAAAAGCAAGAGCAGATGCATAAACAGTTATTGGAAATCATAGAAAACAATGAAAGGGAAAGAATAAAGAGAGAAGCAGCTTGGAAGAATGAGGAGATGGAGAGAATCAGAAAAGATGAAGAGGCTAGAGCCCAAGAAAATTCTCGAAATTTGGCCCTCATATCCTTCATTCAGAACCTGTTGGGCCATGAAATTCAAATCCCCCAACAACCTGCAAAACCATGCAGCAAAAGAGAAGAGGATGAAGTTGAGGCAAGTGCTAGAAAAGAACTGAACAATGATCCAGGTGACAATAGATGGCCTGATGTTGAAGTGCAATCACTCATCACTGTGAGAACTTCATTGGAGCACAAGTTTCGTCTCATGGGATCAAAAGGGACAATATGGGAGGAGATATCTGAAGCAATGAATGGCATGGGGTACAACCGCTCTGCAAAAAAGTGTAAGGAGAAGTGGGAAAACATCAACAAGTACTATAAAAGGACAATAGGGAGTGGCAAGAAAAGGCGTCAAAATAGTAAAACTTGCCCTTACTTTGATGAGTTGGACATTCTGTATAGAAAGGGTCTCTTAAGTATTGGAAATGCCTTGAGCAATACCTGCGGTGTTCCCCAGATTGAAGTAAAGGAGTTGAATGAAACTTGA 918 0.4532 MDLFTGDHFPVPDHVAPFPDSGDLLFAADLLSHRHNPQKLRPISLSFDAEDEDEDDDNSSASTKGHGPRKKRRKMVRKLEDFAKDLVVKVMEKQEQMHKQLLEIIENNERERIKREAAWKNEEMERIRKDEEARAQENSRNLALISFIQNLLGHEIQIPQQPAKPCSKREEDEVEASARKELNNDPGDNRWPDVEVQSLITVRTSLEHKFRLMGSKGTIWEEISEAMNGMGYNRSAKKCKEKWENINKYYKRTIGSGKKRRQNSKTCPYFDELDILYRKGLLSIGNALSNTCGVPQIEVKELNET 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01118 305 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 46 294 - -
Gma15g01118 305 Gene3D - 191 252 - -
Gma15g01118 305 ProSiteProfiles Myb-like domain profile. 183 247 IPR001005 -
Gma15g01118 305 Coils Coil 91 141 - -
Gma15g01118 305 MobiDBLite consensus disorder prediction 165 188 - -
Gma15g01118 305 Pfam Myb/SANT-like DNA-binding domain 189 274 IPR044822 -
Gma15g01118 305 MobiDBLite consensus disorder prediction 160 190 - -
Gma15g01118 305 MobiDBLite consensus disorder prediction 49 75 - -
Gma15g01118 305 CDD GT1 189 253 - -
Gma15g01118 305 PANTHER - 46 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01118 Gma-Chr15 9416540 9418928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01118 70 278 Trihelix Transcription Factor Family AT5G47660 44.843 8.27e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma15g01118 Myb_DNA-bind_4 2.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01118 - - gmx:100815105 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01118 15 9416540 9418928 Gma09g00136 09 1087877 1089766 GST